Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.18□□□□□ -0.3
Efnb3O35393 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.18□□□□□ -0.3
Efnb3O35393 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.18□□□□□ -0.3
Efnb3O35393 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.17□□□□□ -0.3
Efnb3O35393 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Efnb3O35393 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.17□□□□□ -0.3
Efnb3O35393 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.17□□□□□ -0.3
Efnb3O35393 Gm2559-201ENSMUST00000201323 363 ntBASIC13.17□□□□□ -0.3
Efnb3O35393 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Efnb3O35393 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Efnb3O35393 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Efnb3O35393 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Efnb3O35393 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.16□□□□□ -0.3
Efnb3O35393 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.16□□□□□ -0.3
Efnb3O35393 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.16□□□□□ -0.3
Efnb3O35393 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.16□□□□□ -0.3
Efnb3O35393 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.16□□□□□ -0.3
Efnb3O35393 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Efnb3O35393 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Efnb3O35393 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Efnb3O35393 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Efnb3O35393 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Efnb3O35393 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Efnb3O35393 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Efnb3O35393 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Efnb3O35393 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.15□□□□□ -0.3
Efnb3O35393 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Efnb3O35393 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.3
Efnb3O35393 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms