Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.85□□□□□ -0.03
Alx4O35137 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Alx4O35137 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.85□□□□□ -0.03
Alx4O35137 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.85□□□□□ -0.03
Alx4O35137 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.85□□□□□ -0.03
Alx4O35137 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.85□□□□□ -0.03
Alx4O35137 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Alx4O35137 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.85□□□□□ -0.03
Alx4O35137 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Alx4O35137 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.84□□□□□ -0.03
Alx4O35137 Il3ra-202ENSMUST00000223589 738 ntBASIC14.84□□□□□ -0.03
Alx4O35137 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Alx4O35137 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.84□□□□□ -0.03
Alx4O35137 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.84□□□□□ -0.03
Alx4O35137 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Alx4O35137 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx4O35137 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Alx4O35137 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.83□□□□□ -0.03
Alx4O35137 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.83□□□□□ -0.03
Alx4O35137 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx4O35137 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.83□□□□□ -0.04
Alx4O35137 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Gm27275-201ENSMUST00000184318 272 ntBASIC14.83□□□□□ -0.04
Alx4O35137 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.83□□□□□ -0.04
Alx4O35137 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Gm10602-201ENSMUST00000098239 609 ntBASIC14.83□□□□□ -0.04
Alx4O35137 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.83□□□□□ -0.04
Alx4O35137 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx4O35137 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Alx4O35137 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.82□□□□□ -0.04
Alx4O35137 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.82□□□□□ -0.04
Alx4O35137 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.82□□□□□ -0.04
Alx4O35137 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.82□□□□□ -0.04
Alx4O35137 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms