Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm3336J3QMQ6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3336J3QMQ6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3336J3QMQ6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3336J3QMQ6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm3336J3QMQ6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3336J3QMQ6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm3336J3QMQ6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Gm27704-201ENSMUST00000185094 107 ntBASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Gm21362-201ENSMUST00000194272 928 ntBASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3336J3QMQ6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3336J3QMQ6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm3336J3QMQ6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3336J3QMQ6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3336J3QMQ6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm3336J3QMQ6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3336J3QMQ6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3336J3QMQ6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3336J3QMQ6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3336J3QMQ6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms