Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf4lE9Q2N0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf4lE9Q2N0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf4lE9Q2N0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.08□□□□□ -0.15
Cpsf4lE9Q2N0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf4lE9Q2N0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.08□□□□□ -0.15
Cpsf4lE9Q2N0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf4lE9Q2N0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf4lE9Q2N0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Gm18421-201ENSMUST00000204122 625 ntBASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf4lE9Q2N0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Gm11355-201ENSMUST00000121120 306 ntBASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Gm37722-201ENSMUST00000193757 208 ntBASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4lE9Q2N0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms