Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Gm3880A0A1B0GSB3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Gm3880A0A1B0GSB3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms