Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm18958-201ENSMUST00000174258 762 ntBASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm27389-201ENSMUST00000183622 195 ntBASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm7370-201ENSMUST00000219471 767 ntBASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm7213-201ENSMUST00000215977 950 ntBASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms