Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.25□□□□□ -0.29
Trav17A0A075B655 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.24□□□□□ -0.29
Trav17A0A075B655 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Dio3-201ENSMUST00000097228 1449 ntBASIC13.24□□□□□ -0.29
Trav17A0A075B655 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.24□□□□□ -0.29
Trav17A0A075B655 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav17A0A075B655 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav17A0A075B655 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Trav17A0A075B655 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms