Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RPL7AP49-201ENST00000429522 581 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AL591438.1-201ENST00000433508 581 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 IFNWP4-201ENST00000453148 294 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 RPL23AP56-201ENST00000460778 453 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 OR52A4P-201ENST00000472867 958 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 ENPP7P11-201ENST00000505915 627 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC084757.1-201ENST00000559987 490 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 HMGB3P26-201ENST00000560051 582 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 MIR4716-201ENST00000579628 84 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AP005119.2-201ENST00000579735 1105 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC007497.1-201ENST00000610421 561 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC006213.5-201ENST00000619673 288 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 A2MP1-204ENST00000566278 4130 ntBASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA1Q9Y5H4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 GTF2H2B-203ENST00000508065 1432 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AC010928.1-201ENST00000592477 1447 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 IGKV7-3-201ENST00000357453 298 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 RNA5SP241-201ENST00000391326 114 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AP000357.1-201ENST00000409926 1165 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 RNU2-17P-201ENST00000410290 190 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AL357078.2-201ENST00000416486 427 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 RPL17P36-201ENST00000420302 549 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 CHIAP3-201ENST00000423668 1133 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 SEC63P1-201ENST00000425785 1258 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AC023141.6-201ENST00000429418 337 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AL513321.1-201ENST00000441175 761 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AL162591.2-201ENST00000449634 317 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AL353718.1-201ENST00000451028 517 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 TPT1P1-201ENST00000458495 518 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 RN7SKP21-201ENST00000516503 220 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 BUD31P1-201ENST00000521828 359 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 POLR2KP1-201ENST00000553226 168 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AL645927.2-201ENST00000618350 349 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 AC019206.1-201ENST00000621938 425 ntBASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA1Q9Y5H4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 MFSD8-220ENST00000641243 1422 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 ADAM5-202ENST00000399789 1942 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms