Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC027228.2-201ENST00000567141 2154 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 OR5P1P-201ENST00000299512 925 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AL049693.1-201ENST00000402760 611 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 FCF1P5-201ENST00000406490 482 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 RNF19BPX-201ENST00000426224 625 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 YY1P1-201ENST00000427625 668 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AL031584.1-201ENST00000447169 754 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC012671.1-201ENST00000451912 203 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 RN7SL98P-201ENST00000462271 300 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC010476.1-201ENST00000519111 851 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC074029.2-201ENST00000551045 634 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC092868.3-201ENST00000560515 784 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC005520.3-201ENST00000602874 370 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC005962.2-201ENST00000611427 652 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 AC110792.3-201ENST00000595906 1614 ntBASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCF1Q9UBD9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC008033.1-201ENST00000216407 1162 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RNU6-152P-201ENST00000384037 107 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 FABP12P1-201ENST00000401911 322 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC233289.1-201ENST00000403700 508 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AL136131.1-201ENST00000406079 803 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AMZ2P2-201ENST00000406819 1057 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 OR51A6P-201ENST00000418680 1004 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC234779.1-201ENST00000425910 285 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RPL23AP4-201ENST00000427757 463 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 EIF2S2P3-201ENST00000428356 999 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RPS29P17-201ENST00000430795 166 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RPS26P4-201ENST00000431743 355 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AL450263.2-201ENST00000439400 589 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RPL7L1P1-201ENST00000448259 785 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 DHFRP3-201ENST00000455595 559 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RN7SL303P-201ENST00000469773 251 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC109327.1-201ENST00000471666 403 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RPS27AP16-201ENST00000492222 470 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RNU6-491P-201ENST00000516099 110 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RNA5SP360-201ENST00000516555 118 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC067904.2-201ENST00000517322 1283 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC087888.1-201ENST00000550884 1254 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC023575.1-201ENST00000580510 358 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 KPNA2P3-201ENST00000584190 848 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC091178.1-203ENST00000584586 279 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 COX6CP4-201ENST00000605798 228 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 MIR8069-1-201ENST00000616627 86 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 MIR6891-201ENST00000618788 93 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 MIR8069-2-201ENST00000621412 86 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC104820.1-201ENST00000624183 307 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC011944.2-201ENST00000624440 683 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 MIR6830-201ENST00000636015 70 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC090017.1-201ENST00000548612 1779 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms