Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 CR383658.2-201ENST00000547576 1525 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RNA5SP435-201ENST00000364044 108 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RN7SKP128-201ENST00000364270 303 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 U3.10-201ENST00000364459 214 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RNU1-149P-201ENST00000390870 161 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC007066.1-201ENST00000392902 381 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 Y_RNA.599-201ENST00000410489 109 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RPL21P50-201ENST00000417698 477 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 SDCBPP2-201ENST00000424643 885 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AL031736.2-201ENST00000426573 787 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 BMS1P19-201ENST00000433925 393 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 MTCO1P48-201ENST00000448024 1096 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 SNRPGP9-201ENST00000456025 225 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC124945.1-201ENST00000485133 188 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RPS4XP15-201ENST00000489210 795 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 CBX3P3-201ENST00000508108 532 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC087276.1-201ENST00000529659 480 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 OR6C7P-201ENST00000547875 934 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC090515.3-201ENST00000560431 315 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 SULT1C2P1-202ENST00000562418 459 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 SNORD39.3-201ENST00000584451 71 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC107982.3-201ENST00000584957 985 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC060780.2-201ENST00000589047 198 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 DEFB131E-202ENST00000602581 683 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC080078.2-201ENST00000603766 501 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC239868.4-201ENST00000608318 671 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC104073.3-201ENST00000610942 955 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC025594.3-201ENST00000613068 790 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC008115.3-201ENST00000614874 549 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AL158152.1-201ENST00000602652 1435 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AL118496.1-201ENST00000440201 1812 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 XPOTP1-201ENST00000443317 2398 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AL161756.3-201ENST00000641216 2071 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC073264.1-201ENST00000411508 416 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 VTI1BP4-201ENST00000427516 527 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 RPL7P56-201ENST00000429441 717 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 CXCR2P1-202ENST00000443392 1074 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC090638.1-201ENST00000498296 909 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms