Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC091042.1-201ENST00000579213 173 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 MIR4512-201ENST00000583257 77 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AL133338.2-201ENST00000604292 736 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC211433.2-201ENST00000608433 387 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC020634.1-201ENST00000608701 549 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AL445528.2-201ENST00000620582 470 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 KARSP3-201ENST00000571212 1504 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC093311.1-201ENST00000506586 2021 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC131971.1-201ENST00000332881 1482 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 MIR105-2-201ENST00000385083 81 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 OR1F12-201ENST00000402365 945 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 RN7SKP106-201ENST00000410832 272 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 MTCYBP7-201ENST00000419540 1134 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 EIF4EP1-201ENST00000422311 642 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 RPEP2-201ENST00000432149 701 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 NDUFA5P1-201ENST00000433858 341 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 RPL36AP15-201ENST00000444514 266 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 RPS27AP17-201ENST00000463344 455 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 LARP7P4-201ENST00000481075 878 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AC090151.1-201ENST00000520784 730 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AP001922.4-201ENST00000526967 290 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AP000676.2-201ENST00000529711 301 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AC016180.1-201ENST00000567945 403 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 MIR4737-201ENST00000583979 81 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 VN1R84P-201ENST00000593697 235 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 BPIFA4P-203ENST00000603168 689 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 Z98200.1-201ENST00000607298 470 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 MIR7155-201ENST00000615925 56 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AL138721.1-201ENST00000616756 179 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AL356121.2-201ENST00000624715 780 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 CPHL1P-201ENST00000461341 3407 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 AL136964.1-201ENST00000622038 2990 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.28□□□□□ -1.72
CLHC1Q8NHS4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CLHC1Q8NHS4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 LINC00622-201ENST00000562811 1570 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC233968.1-201ENST00000611212 1300 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 RPS20P14-201ENST00000412545 360 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 SNRPFP1-201ENST00000414761 252 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 LYPLA1P1-201ENST00000434514 622 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC012671.1-201ENST00000451912 203 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 DDX39BP2-208ENST00000453923 258 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AP000926.1-201ENST00000479573 241 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 IGLV2-34-201ENST00000490007 283 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms