Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CKS1BP61024 DCAF13P3-201ENST00000561147 1334 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.2□□□□□ -1.9
CKS1BP61024 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CKS1BP61024 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CKS1BP61024 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CKS1BP61024 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CKS1BP61024 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CKS1BP61024 MTCO3P31-201ENST00000405526 789 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 RNU2-37P-201ENST00000410695 177 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 VN1R3-201ENST00000418822 919 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.2□□□□□ -1.9
CKS1BP61024 RPL23AP25-201ENST00000430973 463 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 AL359265.2-201ENST00000434367 631 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 GSTA7P-201ENST00000438425 448 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CKS1BP61024 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.2□□□□□ -1.9
CKS1BP61024 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.2□□□□□ -1.9
CKS1BP61024 OR52A4P-201ENST00000472867 958 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 RPL23AP72-201ENST00000492447 435 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS1BP61024 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS1BP61024 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.2□□□□□ -1.9
CKS1BP61024 MTATP6P1-201ENST00000514057 681 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.2□□□□□ -1.9
CKS1BP61024 AC022790.1-201ENST00000522872 204 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.2□□□□□ -1.9
CKS1BP61024 OR5M7P-201ENST00000526140 972 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 UBTFL9-201ENST00000534504 1148 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 ZNF192P1-203ENST00000565888 810 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS1BP61024 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS1BP61024 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS1BP61024 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.2□□□□□ -1.9
CKS1BP61024 FKBP1AP1-201ENST00000594588 318 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 AL121932.1-201ENST00000605542 214 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 OR7A19P-201ENST00000608051 733 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 AC123768.4-201ENST00000616244 701 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 XIST_intron.1-201ENST00000619444 68 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 AC008115.4-201ENST00000619780 775 ntBASIC3.2□□□□□ -1.9
CKS1BP61024 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.2□□□□□ -1.9
CKS1BP61024 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CKS1BP61024 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CKS1BP61024 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.2□□□□□ -1.9
CKS1BP61024 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS1BP61024 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS1BP61024 AC119744.1-201ENST00000454746 1715 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CKS1BP61024 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS1BP61024 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CKS1BP61024 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 AL589647.1-201ENST00000402485 466 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 OR3A2-201ENST00000408891 1076 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS1BP61024 AF186996.5-201ENST00000418098 904 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC093084.1-201ENST00000424233 687 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 OR2B7P-201ENST00000429302 934 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC009263.1-201ENST00000441193 1239 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 H2AFZP5-201ENST00000446960 382 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AL606490.1-201ENST00000452266 765 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AP000893.1-201ENST00000474462 794 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 PARP4P3-201ENST00000510265 317 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC007016.1-201ENST00000512110 244 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKS1BP61024 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS1BP61024 AL049839.1-201ENST00000556151 657 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS1BP61024 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 AC126915.2-201ENST00000610957 190 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS1BP61024 AL359513.1-201ENST00000614364 557 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 AC099669.2-201ENST00000616549 437 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS1BP61024 THAP12P4-201ENST00000528321 2266 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS1BP61024 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.19□□□□□ -1.9
CKS1BP61024 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS1BP61024 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS1BP61024 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CKS1BP61024 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC099654.2-201ENST00000433031 1980 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms