Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SNORD91B-202ENST00000608459 222 ntBASIC4.59□□□□□ -1.67
CLDN20P56880 AL157392.4-201ENST00000609756 345 ntBASIC4.59□□□□□ -1.67
CLDN20P56880 AL627230.1-201ENST00000613077 211 ntBASIC4.59□□□□□ -1.67
CLDN20P56880 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN20P56880 AL591926.8-201ENST00000616876 211 ntBASIC4.59□□□□□ -1.67
CLDN20P56880 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN20P56880 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN20P56880 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN20P56880 LINC01808-202ENST00000641680 1116 ntBASIC4.59□□□□□ -1.67
CLDN20P56880 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.59□□□□□ -1.68
CLDN20P56880 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CLDN20P56880 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN20P56880 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN20P56880 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CLDN20P56880 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN20P56880 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CLDN20P56880 AC097461.1-201ENST00000568928 2821 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 ENSAP3-201ENST00000312710 333 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLDN20P56880 AC092638.1-201ENST00000411966 1275 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 MTATP6P20-201ENST00000414147 562 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 OSTCP5-201ENST00000425293 453 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN20P56880 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN20P56880 RBMY2QP-201ENST00000429799 1147 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC009238.2-201ENST00000431026 355 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 ARL5AP2-201ENST00000444698 533 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN20P56880 AL050341.1-201ENST00000447743 313 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN20P56880 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN20P56880 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 snoU13.20-201ENST00000459180 104 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC010350.1-201ENST00000504908 231 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN20P56880 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN20P56880 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 AL132857.1-201ENST00000555180 708 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 AGGF1P5-201ENST00000567900 919 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 MIR4691-201ENST00000583764 85 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN20P56880 AC125494.3-201ENST00000602759 455 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC112220.2-201ENST00000605513 533 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC024595.1-201ENST00000623088 387 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 AC104985.3-201ENST00000623479 597 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN20P56880 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN20P56880 AC006927.4-201ENST00000639187 543 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 CASC19-222ENST00000641321 1173 ntBASIC4.58□□□□□ -1.68
CLDN20P56880 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.58□□□□□ -1.68
CLDN20P56880 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN20P56880 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN20P56880 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 AC083843.2-201ENST00000568248 6253 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 ZNF29P-201ENST00000225587 168 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLDN20P56880 RNU6-543P-201ENST00000362576 108 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLDN20P56880 SNORA2.3-201ENST00000383920 135 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AL589647.1-201ENST00000402485 466 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 OR51A6P-201ENST00000418680 1004 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 AL358176.3-201ENST00000420757 454 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN20P56880 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 NPM1P22-201ENST00000427761 952 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 RPL31P44-201ENST00000447680 377 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 RN7SL610P-201ENST00000463845 291 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 RN7SL826P-201ENST00000479724 288 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms