Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL139811.1-201ENST00000424779 2299 ntBASIC4.88□□□□□ -1.63
SSR1P43307 AL031119.1-201ENST00000404707 1879 ntBASIC4.88□□□□□ -1.63
SSR1P43307 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.88□□□□□ -1.63
SSR1P43307 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSR1P43307 AC108467.2-201ENST00000617640 1597 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AL391684.1-202ENST00000641293 1636 ntBASIC4.87□□□□□ -1.63
SSR1P43307 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SSR1P43307 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.87□□□□□ -1.63
SSR1P43307 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSR1P43307 Z98745.1-201ENST00000402553 494 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AL138878.1-201ENST00000405131 347 ntBASIC4.87□□□□□ -1.63
SSR1P43307 RN7SKP267-201ENST00000410381 285 ntBASIC4.87□□□□□ -1.63
SSR1P43307 RPL23AP26-201ENST00000412728 464 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.87□□□□□ -1.63
SSR1P43307 AC004074.1-201ENST00000421810 1063 ntBASIC4.87□□□□□ -1.63
SSR1P43307 PPIAP13-201ENST00000434706 478 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.87□□□□□ -1.63
SSR1P43307 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.87□□□□□ -1.63
SSR1P43307 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.87□□□□□ -1.63
SSR1P43307 ANP32BP2-201ENST00000454525 545 ntBASIC4.87□□□□□ -1.63
SSR1P43307 RN7SL817P-201ENST00000480777 288 ntBASIC4.87□□□□□ -1.63
SSR1P43307 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.87□□□□□ -1.63
SSR1P43307 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.87□□□□□ -1.63
SSR1P43307 USP9YP5-201ENST00000511770 630 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.87□□□□□ -1.63
SSR1P43307 AC025857.1-201ENST00000525252 377 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.87□□□□□ -1.63
SSR1P43307 AP006289.1-201ENST00000538089 277 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSR1P43307 BGLT3-201ENST00000564523 994 ntBASIC4.87□□□□□ -1.63
SSR1P43307 MIR4646-201ENST00000580775 63 ntBASIC4.87□□□□□ -1.63
SSR1P43307 MIR3667-201ENST00000581025 74 ntBASIC4.87□□□□□ -1.63
SSR1P43307 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSR1P43307 AC091979.2-201ENST00000607514 214 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AL096803.3-201ENST00000609032 532 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AL669942.2-201ENST00000620352 697 ntBASIC4.87□□□□□ -1.63
SSR1P43307 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
SSR1P43307 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.87□□□□□ -1.63
SSR1P43307 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.87□□□□□ -1.63
SSR1P43307 AL627171.1-201ENST00000618845 1308 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AC010300.1-201ENST00000600671 5134 ntBASIC4.87□□□□□ -1.63
SSR1P43307 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SSR1P43307 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
SSR1P43307 AC132825.1-201ENST00000463573 2247 ntBASIC4.87□□□□□ -1.63
SSR1P43307 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
SSR1P43307 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
SSR1P43307 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 RNU4-7P-201ENST00000364758 141 ntBASIC4.86□□□□□ -1.63
SSR1P43307 U3.15-201ENST00000365398 212 ntBASIC4.86□□□□□ -1.63
SSR1P43307 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.86□□□□□ -1.63
SSR1P43307 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.86□□□□□ -1.63
SSR1P43307 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 RSU1P3-201ENST00000412878 835 ntBASIC4.86□□□□□ -1.63
SSR1P43307 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.86□□□□□ -1.63
SSR1P43307 RCC2P2-201ENST00000422174 918 ntBASIC4.86□□□□□ -1.63
SSR1P43307 AC007559.1-201ENST00000428736 355 ntBASIC4.86□□□□□ -1.63
SSR1P43307 CYCSP11-201ENST00000436426 315 ntBASIC4.86□□□□□ -1.63
SSR1P43307 PTMAP6-201ENST00000439110 327 ntBASIC4.86□□□□□ -1.63
SSR1P43307 AC011753.3-201ENST00000443436 406 ntBASIC4.86□□□□□ -1.63
SSR1P43307 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 AC096741.1-201ENST00000472250 846 ntBASIC4.86□□□□□ -1.63
SSR1P43307 AC104763.1-201ENST00000475274 360 ntBASIC4.86□□□□□ -1.63
SSR1P43307 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.86□□□□□ -1.63
SSR1P43307 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.86□□□□□ -1.63
SSR1P43307 SOX5P1-201ENST00000524155 1127 ntBASIC4.86□□□□□ -1.63
SSR1P43307 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.86□□□□□ -1.63
SSR1P43307 AL109741.3-201ENST00000561748 592 ntBASIC4.86□□□□□ -1.63
SSR1P43307 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.86□□□□□ -1.63
SSR1P43307 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 AC009303.3-201ENST00000591103 736 ntBASIC4.86□□□□□ -1.63
SSR1P43307 GMCL1P2-201ENST00000605230 823 ntBASIC4.86□□□□□ -1.63
SSR1P43307 AL391358.1-201ENST00000605342 190 ntBASIC4.86□□□□□ -1.63
SSR1P43307 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.86□□□□□ -1.63
SSR1P43307 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 AC087385.3-201ENST00000620477 187 ntBASIC4.86□□□□□ -1.63
SSR1P43307 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SSR1P43307 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSR1P43307 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.86□□□□□ -1.63
SSR1P43307 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 HSPD1P14-201ENST00000432666 1618 ntBASIC4.86□□□□□ -1.63
SSR1P43307 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSR1P43307 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSR1P43307 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.85□□□□□ -1.63
SSR1P43307 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSR1P43307 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSR1P43307 RN7SKP149-201ENST00000363008 344 ntBASIC4.85□□□□□ -1.63
SSR1P43307 RHOT1P2-201ENST00000366423 333 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AL645927.1-201ENST00000396783 406 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms