Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC007546.1-201ENST00000619452 559 ntBASIC4.53□□□□□ -1.68
SLC1A1P43005 AC138907.10-201ENST00000623708 983 ntBASIC4.53□□□□□ -1.68
SLC1A1P43005 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC1A1P43005 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC1A1P43005 MAPK10-304ENST00000641341 3984 ntBASIC4.53□□□□□ -1.68
SLC1A1P43005 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC1A1P43005 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC1A1P43005 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
SLC1A1P43005 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC1A1P43005 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC1A1P43005 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC1A1P43005 AL450326.2-201ENST00000421913 1962 ntBASIC4.53□□□□□ -1.68
SLC1A1P43005 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.53□□□□□ -1.69
SLC1A1P43005 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC1A1P43005 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC1A1P43005 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC1A1P43005 AC008033.1-201ENST00000216407 1162 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 RHOT1P2-201ENST00000366423 333 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AC104297.1-201ENST00000393779 870 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AL035419.1-201ENST00000397037 564 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AL607077.1-201ENST00000401718 499 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 TMSB10P2-201ENST00000416049 131 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC1A1P43005 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 AC092570.3-201ENST00000420113 693 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC1A1P43005 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC1A1P43005 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC1A1P43005 CEACAMP1-201ENST00000434624 1035 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC1A1P43005 AC017037.1-201ENST00000508460 471 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SLC1A1P43005 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC1A1P43005 FAM106CP-201ENST00000582212 507 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 MIR4480-201ENST00000582492 71 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AC012409.3-201ENST00000611343 981 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AL161616.1-201ENST00000611867 286 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC1A1P43005 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC1A1P43005 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SLC1A1P43005 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC1A1P43005 AC093535.2-201ENST00000624769 2326 ntBASIC4.52□□□□□ -1.69
SLC1A1P43005 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC1A1P43005 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC1A1P43005 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC1A1P43005 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC1A1P43005 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC1A1P43005 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SLC1A1P43005 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC1A1P43005 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC1A1P43005 MIR93-201ENST00000385024 80 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 RPL5P19-201ENST00000404228 893 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC1A1P43005 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC1A1P43005 AC073264.2-201ENST00000448886 166 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 RPL21P126-201ENST00000470049 478 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AC105918.1-201ENST00000474399 838 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 RN7SL826P-201ENST00000479724 288 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 RPL32P9-201ENST00000487963 407 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AC010374.1-201ENST00000503762 1237 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 BNIP3P41-201ENST00000503774 571 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 NDUFB4P12-201ENST00000513465 390 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC1A1P43005 IGHV3-63-201ENST00000518422 341 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC1A1P43005 UBTFL9-201ENST00000534504 1148 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC1A1P43005 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.51□□□□□ -1.69
SLC1A1P43005 MTND2P13-201ENST00000577438 1039 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 NF1P10-201ENST00000613227 742 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 RMST_9.1-201ENST00000619945 193 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 MIR7702-201ENST00000621931 59 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AC008785.1-201ENST00000624475 456 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC1A1P43005 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SLC1A1P43005 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC1A1P43005 HSPA8P17-201ENST00000427029 1382 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.51□□□□□ -1.69
SLC1A1P43005 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC1A1P43005 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC1A1P43005 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC1A1P43005 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SLC1A1P43005 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC1A1P43005 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC1A1P43005 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC1A1P43005 AC010132.2-201ENST00000295493 1043 ntBASIC4.5□□□□□ -1.69
SLC1A1P43005 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC1A1P43005 AC079741.1-201ENST00000321498 212 ntBASIC4.5□□□□□ -1.69
SLC1A1P43005 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC1A1P43005 RNA5SP388-201ENST00000362584 119 ntBASIC4.5□□□□□ -1.69
SLC1A1P43005 RNA5SP502-201ENST00000362694 119 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms