Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFC4P35249 NXPH1-205ENST00000602349 1953 ntBASIC5.49□□□□□ -1.53
RFC4P35249 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFC4P35249 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
RFC4P35249 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RFC4P35249 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC4P35249 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC4P35249 OR56B2P-201ENST00000317102 954 ntBASIC5.48□□□□□ -1.53
RFC4P35249 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RFC4P35249 ENSAP1-201ENST00000392855 326 ntBASIC5.48□□□□□ -1.53
RFC4P35249 MRPL48P1-201ENST00000445390 636 ntBASIC5.48□□□□□ -1.53
RFC4P35249 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.48□□□□□ -1.53
RFC4P35249 AC107015.1-201ENST00000466902 747 ntBASIC5.48□□□□□ -1.53
RFC4P35249 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFC4P35249 MORF4L2P1-201ENST00000503761 858 ntBASIC5.48□□□□□ -1.53
RFC4P35249 FTH1P21-201ENST00000512179 511 ntBASIC5.48□□□□□ -1.53
RFC4P35249 RPS27AP18-201ENST00000515536 459 ntBASIC5.48□□□□□ -1.53
RFC4P35249 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.48□□□□□ -1.53
RFC4P35249 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.48□□□□□ -1.53
RFC4P35249 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.48□□□□□ -1.53
RFC4P35249 AC008739.3-201ENST00000603262 127 ntBASIC5.48□□□□□ -1.53
RFC4P35249 AC008833.1-201ENST00000611633 691 ntBASIC5.48□□□□□ -1.53
RFC4P35249 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.48□□□□□ -1.53
RFC4P35249 AC067931.1-201ENST00000624190 671 ntBASIC5.48□□□□□ -1.53
RFC4P35249 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RFC4P35249 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFC4P35249 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC4P35249 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.48□□□□□ -1.53
RFC4P35249 AC092162.3-201ENST00000624511 1624 ntBASIC5.48□□□□□ -1.53
RFC4P35249 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFC4P35249 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RFC4P35249 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC4P35249 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC4P35249 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC4P35249 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC4P35249 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC4P35249 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.47□□□□□ -1.53
RFC4P35249 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RFC4P35249 RNU6-761P-201ENST00000384148 107 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AC097374.1-203ENST00000400783 485 ntBASIC5.47□□□□□ -1.53
RFC4P35249 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.47□□□□□ -1.53
RFC4P35249 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC4P35249 AL356276.2-201ENST00000435919 558 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC4P35249 RPL35AP15-201ENST00000468042 339 ntBASIC5.47□□□□□ -1.53
RFC4P35249 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC4P35249 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC4P35249 DYNLL1P4-201ENST00000549314 266 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC4P35249 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC4P35249 AC122134.1-201ENST00000565664 1104 ntBASIC5.47□□□□□ -1.53
RFC4P35249 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.47□□□□□ -1.53
RFC4P35249 MIR3944-201ENST00000581277 108 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AC006272.2-201ENST00000594725 163 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AC130352.1-201ENST00000602979 661 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AL713998.2-201ENST00000604538 1198 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AC039056.2-201ENST00000622261 511 ntBASIC5.47□□□□□ -1.53
RFC4P35249 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFC4P35249 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC4P35249 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.47□□□□□ -1.53
RFC4P35249 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RFC4P35249 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.47□□□□□ -1.53
RFC4P35249 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC4P35249 RLIMP2-201ENST00000427891 1563 ntBASIC5.46□□□□□ -1.53
RFC4P35249 MAPK10-320ENST00000641462 6696 ntBASIC5.46□□□□□ -1.54
RFC4P35249 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFC4P35249 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RFC4P35249 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RFC4P35249 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC4P35249 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC4P35249 GOT2P5-201ENST00000433995 546 ntBASIC5.46□□□□□ -1.54
RFC4P35249 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC4P35249 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC4P35249 BTF3P6-201ENST00000448054 499 ntBASIC5.46□□□□□ -1.54
RFC4P35249 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.46□□□□□ -1.54
RFC4P35249 AL591623.2-201ENST00000449978 222 ntBASIC5.46□□□□□ -1.54
RFC4P35249 RPL23AP2-201ENST00000471227 466 ntBASIC5.46□□□□□ -1.54
RFC4P35249 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
RFC4P35249 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC4P35249 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.46□□□□□ -1.54
RFC4P35249 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC4P35249 IFITM8P-201ENST00000522529 394 ntBASIC5.46□□□□□ -1.54
RFC4P35249 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.46□□□□□ -1.54
RFC4P35249 AC090181.2-201ENST00000602975 672 ntBASIC5.46□□□□□ -1.54
RFC4P35249 AC096586.2-201ENST00000610260 441 ntBASIC5.46□□□□□ -1.54
RFC4P35249 CR392039.5-201ENST00000623201 510 ntBASIC5.46□□□□□ -1.54
RFC4P35249 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFC4P35249 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.46□□□□□ -1.54
RFC4P35249 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms