Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RNU1-132P-201ENST00000364300 164 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 SNRPFP1-201ENST00000414761 252 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 EIF2S2P3-201ENST00000428356 999 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC4P09017 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC4P09017 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC4P09017 RPL23AP37-201ENST00000479658 549 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC4P09017 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC4P09017 IGBP1P5-201ENST00000507524 1000 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 ATP1B1P1-201ENST00000509767 915 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 AC108043.1-201ENST00000512696 574 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC4P09017 TCP11X3P-202ENST00000514289 1254 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 AP003730.1-201ENST00000524605 285 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC4P09017 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC4P09017 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC4P09017 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXC4P09017 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC4P09017 MIR3939-201ENST00000582614 106 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 AC103792.1-201ENST00000603591 919 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC4P09017 AL445567.2-201ENST00000618935 498 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 AL731566.2-201ENST00000618971 317 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC4P09017 OR52H1-202ENST00000641796 1061 ntBASIC4.33□□□□□ -1.72
HOXC4P09017 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC4P09017 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC4P09017 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC4P09017 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC4P09017 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HOXC4P09017 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
HOXC4P09017 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC4P09017 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC4P09017 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC4P09017 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HOXC4P09017 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC4P09017 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 OR10J6P-201ENST00000289731 930 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 ST13P16-201ENST00000401760 781 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 FABP12P1-201ENST00000401911 322 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AMZ2P2-201ENST00000406819 1057 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 RPL23AP26-201ENST00000412728 464 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC4P09017 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC4P09017 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC4P09017 AC073136.2-201ENST00000417282 849 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC4P09017 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 CDY14P-201ENST00000431260 1014 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 PPIAP13-201ENST00000434706 478 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 CDY12P-201ENST00000440679 1015 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC4P09017 CDY13P-201ENST00000445813 1015 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 CDY23P-201ENST00000451661 1014 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC4P09017 UQCRHP4-201ENST00000471686 272 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AC093267.1-201ENST00000489176 961 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 RPL35P6-201ENST00000490024 372 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC4P09017 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 TRAV8-5-201ENST00000537369 341 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 TRAV11-201ENST00000539512 339 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 TOMM20P2-201ENST00000540082 421 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC4P09017 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC4P09017 RPL23AP97-201ENST00000568955 471 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXC4P09017 IPO5P1-202ENST00000600039 287 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 SNORD91B-202ENST00000608459 222 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AC092653.1-201ENST00000608509 531 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 AL021997.2-201ENST00000615674 271 ntBASIC4.32□□□□□ -1.72
HOXC4P09017 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC4P09017 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC4P09017 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HOXC4P09017 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC4P09017 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms