Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RPS26P39-201ENST00000469206 341 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC012158.1-204ENST00000483430 465 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.33□□□□□ -1.72
MT-ND1P03886 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 MTND3P24-201ENST00000506306 329 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 NPM1P6-201ENST00000521088 871 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 BUD31P1-201ENST00000521828 359 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 OR4R2P-201ENST00000530815 597 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.33□□□□□ -1.72
MT-ND1P03886 AC021483.2-201ENST00000567415 758 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 MTND4LP25-201ENST00000570218 163 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 MIR5699-201ENST00000578903 90 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 AC091178.1-203ENST00000584586 279 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC110743.1-201ENST00000584870 478 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC022726.1-201ENST00000587475 207 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.33□□□□□ -1.72
MT-ND1P03886 RPL7P50-201ENST00000600588 727 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 MTCO3P22-201ENST00000603219 784 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC133552.5-201ENST00000604266 540 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC008966.2-201ENST00000606157 453 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AL450270.1-201ENST00000606160 391 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AL008729.2-201ENST00000606393 473 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 AC009318.3-201ENST00000616916 503 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 SNORA11.6-201ENST00000619030 128 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 AC080188.3-201ENST00000624842 748 ntBASIC4.33□□□□□ -1.72
MT-ND1P03886 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MT-ND1P03886 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.33□□□□□ -1.72
MT-ND1P03886 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.33□□□□□ -1.72
MT-ND1P03886 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.33□□□□□ -1.72
MT-ND1P03886 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MT-ND1P03886 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MT-ND1P03886 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.33□□□□□ -1.72
MT-ND1P03886 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 AC091046.3-201ENST00000631455 1574 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 RNA5SP305-201ENST00000362665 119 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 RN7SKP95-201ENST00000362860 303 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 RNU4-4P-201ENST00000364588 130 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 SNORD51.1-201ENST00000365405 77 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 OR51B3P-201ENST00000412287 913 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 RANP4-201ENST00000413361 655 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.32□□□□□ -1.72
MT-ND1P03886 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 GEMIN8P3-201ENST00000445417 720 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 IFNWP4-201ENST00000453148 294 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 MTND2P30-201ENST00000456663 382 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 MTND2P39-201ENST00000457230 764 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 RN7SL727P-201ENST00000482164 296 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AC090013.1-201ENST00000485147 480 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 NIP7P2-201ENST00000485801 544 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AC108022.1-201ENST00000493466 478 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AC008628.1-201ENST00000508663 265 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.32□□□□□ -1.72
MT-ND1P03886 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.32□□□□□ -1.72
MT-ND1P03886 RNA5SP360-201ENST00000516555 118 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 IGKV2D-10-201ENST00000520194 281 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MT-ND1P03886 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.32□□□□□ -1.72
MT-ND1P03886 PDCD5P1-201ENST00000543528 309 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 MIR4716-201ENST00000579628 84 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.32□□□□□ -1.72
MT-ND1P03886 AL671309.1-201ENST00000603750 544 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AC090525.3-201ENST00000605601 189 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.32□□□□□ -1.72
MT-ND1P03886 CR589904.2-201ENST00000612533 440 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.32□□□□□ -1.72
MT-ND1P03886 MIR6826-201ENST00000617808 98 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AC009237.17-201ENST00000618111 748 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 MIR7154-201ENST00000620673 73 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 AP002799.1-201ENST00000623552 423 ntBASIC4.32□□□□□ -1.72
MT-ND1P03886 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MT-ND1P03886 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.32□□□□□ -1.72
MT-ND1P03886 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms