Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC010487.1-201ENST00000594408 1172 ntBASIC4.88□□□□□ -1.63
TRUB2O95900 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.88□□□□□ -1.63
TRUB2O95900 AC073091.2-201ENST00000603205 907 ntBASIC4.88□□□□□ -1.63
TRUB2O95900 AC087283.1-201ENST00000604029 1074 ntBASIC4.88□□□□□ -1.63
TRUB2O95900 AC018618.2-201ENST00000604770 446 ntBASIC4.88□□□□□ -1.63
TRUB2O95900 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.88□□□□□ -1.63
TRUB2O95900 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.88□□□□□ -1.63
TRUB2O95900 AC097505.1-201ENST00000610199 565 ntBASIC4.88□□□□□ -1.63
TRUB2O95900 MIR6780A-201ENST00000615089 68 ntBASIC4.88□□□□□ -1.63
TRUB2O95900 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRUB2O95900 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.88□□□□□ -1.63
TRUB2O95900 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRUB2O95900 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.88□□□□□ -1.63
TRUB2O95900 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRUB2O95900 AL672167.1-203ENST00000641299 2975 ntBASIC4.88□□□□□ -1.63
TRUB2O95900 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.88□□□□□ -1.63
TRUB2O95900 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRUB2O95900 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.87□□□□□ -1.63
TRUB2O95900 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 MIR16-2-201ENST00000362117 81 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 MIR142-201ENST00000384835 87 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.87□□□□□ -1.63
TRUB2O95900 RNU2-50P-201ENST00000410494 143 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 RN7SKP106-201ENST00000410832 272 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.87□□□□□ -1.63
TRUB2O95900 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.87□□□□□ -1.63
TRUB2O95900 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 AL354710.1-201ENST00000453641 246 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 RPL36AP41-201ENST00000493820 306 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 AC010627.1-201ENST00000503819 1294 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.87□□□□□ -1.63
TRUB2O95900 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.87□□□□□ -1.63
TRUB2O95900 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.87□□□□□ -1.63
TRUB2O95900 AC104229.1-201ENST00000561364 255 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.87□□□□□ -1.63
TRUB2O95900 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 BNIP3P19-201ENST00000605397 577 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 AC120053.1-201ENST00000607706 736 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.87□□□□□ -1.63
TRUB2O95900 AC234782.5-201ENST00000617723 324 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.87□□□□□ -1.63
TRUB2O95900 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TRUB2O95900 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 BX005019.1-201ENST00000561881 1810 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.87□□□□□ -1.63
TRUB2O95900 AC009313.2-201ENST00000417893 1941 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 MTCO1P4-201ENST00000520516 1409 ntBASIC4.87□□□□□ -1.63
TRUB2O95900 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRUB2O95900 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
TRUB2O95900 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.86□□□□□ -1.63
TRUB2O95900 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.86□□□□□ -1.63
TRUB2O95900 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRUB2O95900 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 SNORA62.2-201ENST00000364672 152 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 CYB5AP4-201ENST00000396692 399 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 AC233289.1-201ENST00000403700 508 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AL590139.1-201ENST00000416267 400 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AC019050.1-201ENST00000418508 492 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.86□□□□□ -1.63
TRUB2O95900 MOB1AP2-201ENST00000446060 614 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AC073264.2-201ENST00000448886 166 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 CYCSP42-201ENST00000450823 238 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AL513533.1-201ENST00000453728 415 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AC015908.1-201ENST00000478739 476 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.86□□□□□ -1.63
TRUB2O95900 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 AC063949.1-201ENST00000552900 865 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 RN7SL690P-201ENST00000582087 240 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.86□□□□□ -1.63
TRUB2O95900 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRUB2O95900 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.86□□□□□ -1.63
TRUB2O95900 AC068790.7-201ENST00000602347 528 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.86□□□□□ -1.63
TRUB2O95900 AC006213.4-201ENST00000616184 634 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AC253576.2-201ENST00000618815 580 ntBASIC4.86□□□□□ -1.63
TRUB2O95900 AP001005.3-201ENST00000622049 129 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms