Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTDNEP1O95476 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 LINC01109-201ENST00000603837 3081 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC116667.1-201ENST00000604855 2072 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 SNORD74.4-201ENST00000364129 80 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 RPS27AP11-201ENST00000402798 447 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 PGBD4P8-201ENST00000412993 562 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 OR10D4P-201ENST00000525892 951 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 RPL23AP87-202ENST00000573039 466 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 MIR4700-201ENST00000578311 74 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 AC068020.1-201ENST00000594215 661 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 AL139395.1-201ENST00000603662 160 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDNEP1O95476 AL445567.2-201ENST00000618935 498 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 MIR7641-1-201ENST00000627518 61 ntBASIC4.79□□□□□ -1.64
CTDNEP1O95476 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDNEP1O95476 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTDNEP1O95476 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTDNEP1O95476 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTDNEP1O95476 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 AC073143.1-201ENST00000436316 395 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 SEPT14P1-201ENST00000458703 648 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 AC010469.1-201ENST00000463864 576 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 IGKV2-38-201ENST00000517443 247 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 AC009643.1-201ENST00000532030 391 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 UBTFL9-201ENST00000534504 1148 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 AC008638.3-201ENST00000603341 463 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 QTRT1P1-201ENST00000604344 1078 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 AP005264.7-201ENST00000625003 745 ntBASIC4.78□□□□□ -1.64
CTDNEP1O95476 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.78□□□□□ -1.64
CTDNEP1O95476 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTDNEP1O95476 HSPD1P11-201ENST00000508643 1702 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 AL356276.2-201ENST00000435919 558 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 RPS20P4-201ENST00000461659 355 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 RPL31P61-201ENST00000496160 376 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 KATNBL1P4-201ENST00000503545 918 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 AL358913.1-201ENST00000554342 121 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 AC090246.1-201ENST00000616499 426 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 AL773545.4-201ENST00000637262 310 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 AL513478.4-201ENST00000641636 310 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 SCN1A-220ENST00000641603 12506 ntBASIC4.77□□□□□ -1.65
CTDNEP1O95476 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CTDNEP1O95476 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTDNEP1O95476 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 NEAT1-202ENST00000501122 22743 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTDNEP1O95476 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms