Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 RNA5SP502-201ENST00000362694 119 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 RN7SKP15-201ENST00000364742 309 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 AL162591.2-201ENST00000449634 317 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.36□□□□□ -1.87
SSSCA1O60232 RPL23AP81-201ENST00000455252 467 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AC105918.1-201ENST00000474399 838 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.36□□□□□ -1.87
SSSCA1O60232 AC011005.3-201ENST00000491624 395 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 RPL23AP72-201ENST00000492447 435 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.36□□□□□ -1.87
SSSCA1O60232 AC106872.4-201ENST00000510050 523 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.36□□□□□ -1.87
SSSCA1O60232 IGKV3D-34-201ENST00000522638 302 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AC090819.1-201ENST00000523800 1111 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.36□□□□□ -1.87
SSSCA1O60232 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.36□□□□□ -1.87
SSSCA1O60232 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 AC079171.1-201ENST00000568788 914 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AC012146.2-201ENST00000576545 416 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.36□□□□□ -1.87
SSSCA1O60232 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 AC078899.5-201ENST00000612475 178 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AC067852.7-201ENST00000623270 535 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 AL049536.1-201ENST00000625043 744 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.36□□□□□ -1.87
SSSCA1O60232 AL929601.4-201ENST00000613011 1341 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 ASNSP1-201ENST00000518311 1939 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SSSCA1O60232 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
SSSCA1O60232 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.36□□□□□ -1.87
SSSCA1O60232 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SSSCA1O60232 MAPK10-373ENST00000641983 6772 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 NCAPGP1-201ENST00000505112 1814 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.35□□□□□ -1.87
SSSCA1O60232 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSSCA1O60232 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSSCA1O60232 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 RNU6-178P-201ENST00000384631 104 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSSCA1O60232 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.35□□□□□ -1.87
SSSCA1O60232 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 AC002069.1-201ENST00000429649 1159 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 NDUFA5P1-201ENST00000433858 341 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.35□□□□□ -1.87
SSSCA1O60232 NDUFS5P3-201ENST00000450668 321 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.35□□□□□ -1.87
SSSCA1O60232 RPL36AP13-201ENST00000457490 317 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 RPL21P126-201ENST00000470049 478 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 RPL12P20-201ENST00000475538 479 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 RN7SL809P-201ENST00000482040 297 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.35□□□□□ -1.87
SSSCA1O60232 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AC005798.1-201ENST00000513715 387 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.35□□□□□ -1.87
SSSCA1O60232 RNA5SP34-201ENST00000516887 130 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AP000827.1-201ENST00000527814 258 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AC135001.1-201ENST00000544546 283 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 HMGN2P6-201ENST00000551091 273 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.35□□□□□ -1.87
SSSCA1O60232 UBE2FP2-201ENST00000566646 462 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 MIR3176-201ENST00000582210 90 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AC069061.3-201ENST00000582254 823 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AL451044.1-201ENST00000604867 238 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 MIR6768-201ENST00000610734 72 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AL591424.2-201ENST00000617023 128 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AP005019.3-201ENST00000620418 560 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SSSCA1O60232 AL627171.1-201ENST00000618845 1308 ntBASIC3.35□□□□□ -1.87
SSSCA1O60232 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.35□□□□□ -1.87
SSSCA1O60232 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.35□□□□□ -1.87
SSSCA1O60232 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
SSSCA1O60232 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSSCA1O60232 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SSSCA1O60232 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSSCA1O60232 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.34□□□□□ -1.87
SSSCA1O60232 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.34□□□□□ -1.87
SSSCA1O60232 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSSCA1O60232 MIR331-201ENST00000362302 94 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms