Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNU1-130P-201ENST00000363930 160 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN3O15551 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN3O15551 GSTA12P-201ENST00000402398 508 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 SNRPFP1-201ENST00000414761 252 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 TMSB10P2-201ENST00000416049 131 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 RNF19BPX-201ENST00000426224 625 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AL732292.1-201ENST00000426692 226 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AC011998.1-201ENST00000433403 117 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 FTH1P16-201ENST00000435241 552 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AC009220.1-201ENST00000451614 275 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN3O15551 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN3O15551 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN3O15551 AC034205.1-201ENST00000520621 638 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN3O15551 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN3O15551 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN3O15551 GSTP1P1-201ENST00000548078 319 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN3O15551 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN3O15551 AC068831.4-201ENST00000556118 109 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AL390726.5-202ENST00000564800 256 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN3O15551 MIR4284-201ENST00000578924 81 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AF230666.2-201ENST00000602328 725 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AC090181.2-201ENST00000602975 672 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AC103792.1-201ENST00000603591 919 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN3O15551 AL023583.1-201ENST00000607518 1143 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN3O15551 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 AL121873.1-201ENST00000616013 524 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN3O15551 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN3O15551 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN3O15551 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN3O15551 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN3O15551 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CLDN3O15551 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN3O15551 AL450326.2-201ENST00000421913 1962 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN3O15551 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN3O15551 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN3O15551 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN3O15551 AP001002.1-201ENST00000625148 1513 ntBASIC4.87□□□□□ -1.63
CLDN3O15551 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLDN3O15551 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN3O15551 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN3O15551 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CLDN3O15551 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN3O15551 RNU1-63P-201ENST00000383902 164 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 MIR141-201ENST00000384975 95 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN3O15551 DHFRP5-201ENST00000406944 564 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 AC062016.2-201ENST00000420950 676 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 RPL12P34-201ENST00000424532 479 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 RPL18P10-201ENST00000425606 538 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN3O15551 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN3O15551 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN3O15551 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN3O15551 RPS6P2-201ENST00000454208 705 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 ATP5G1P3-201ENST00000463301 410 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
CLDN3O15551 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN3O15551 RPL21P6-201ENST00000479171 504 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 NIP7P2-201ENST00000485801 544 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 PCNAP1-201ENST00000505363 709 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN3O15551 RNU6-551P-201ENST00000516661 103 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN3O15551 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN3O15551 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN3O15551 ATP5J2P6-201ENST00000565203 266 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN3O15551 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN3O15551 AC068020.1-201ENST00000594215 661 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 AC022387.2-201ENST00000604050 448 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN3O15551 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN3O15551 OR51H2P-202ENST00000641424 3046 ntBASIC4.86□□□□□ -1.63
CLDN3O15551 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN3O15551 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN3O15551 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN3O15551 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLDN3O15551 EOGT-210ENST00000615922 1931 ntBASIC4.85□□□□□ -1.63
CLDN3O15551 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN3O15551 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN3O15551 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLDN3O15551 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN3O15551 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
CLDN3O15551 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN3O15551 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN3O15551 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN3O15551 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN3O15551 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLDN3O15551 RNA5SP151-201ENST00000365632 117 ntBASIC4.85□□□□□ -1.63
CLDN3O15551 RNU6-178P-201ENST00000384631 104 ntBASIC4.85□□□□□ -1.63
CLDN3O15551 MIR7-1-201ENST00000384871 110 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms