Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 MTND4LP21-201ENST00000415303 295 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 RPL12P28-201ENST00000430852 489 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AP000936.3-201ENST00000438127 255 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 PHBP16-201ENST00000446318 950 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 BNIP3P41-201ENST00000503774 571 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 OR5M7P-201ENST00000526140 972 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC090948.1-201ENST00000607464 549 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AL135786.2-201ENST00000608422 615 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC009704.2-201ENST00000618739 483 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 MIR7703-201ENST00000620784 77 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC138907.10-201ENST00000623708 983 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC140479.6-201ENST00000633535 357 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 NOL8P1-201ENST00000508336 3529 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC093535.2-201ENST00000624769 2326 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 MAPK10-304ENST00000641341 3984 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RNA5SP505-201ENST00000364748 108 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RNU6-178P-201ENST00000384631 104 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RPL5P19-201ENST00000404228 893 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RPL23AP52-201ENST00000439311 478 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AL138878.2-201ENST00000440581 1241 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RN7SL98P-201ENST00000462271 300 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RN7SL810P-201ENST00000493031 276 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 PARP4P3-201ENST00000510265 317 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AC069240.1-201ENST00000548774 375 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AL121839.1-201ENST00000556233 1185 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 SNORD39.2-201ENST00000579995 76 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AL035461.2-201ENST00000619201 524 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 MIR7702-201ENST00000621931 59 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 MIR6730-201ENST00000622213 67 ntBASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS29Q9UBQ0 AL137100.1-201ENST00000556703 1620 ntBASIC4.09□□□□□ -1.76
VPS29Q9UBQ0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS29Q9UBQ0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS29Q9UBQ0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VPS29Q9UBQ0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
VPS29Q9UBQ0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS29Q9UBQ0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RNA5SP388-201ENST00000362584 119 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RNA5SP332-201ENST00000391063 115 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AC104297.1-201ENST00000393779 870 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 Z98755.1-201ENST00000407015 1384 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 MIR1179-201ENST00000408703 91 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 OR2X1P-201ENST00000421144 687 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 EIF2AP4-201ENST00000424793 1781 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AL157831.1-201ENST00000426134 473 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms