Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 AC011270.1-201ENST00000558606 583 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 AC087499.8-201ENST00000578406 226 ntBASIC4.1□□□□□ -1.75
CCDC88CQ9P219 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CCDC88CQ9P219 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 RNA5SP52-201ENST00000362448 134 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AP000357.1-201ENST00000409926 1165 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 RNA5SP36-201ENST00000410197 133 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AL445213.1-201ENST00000412589 747 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AL356276.2-201ENST00000435919 558 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 IGLV3-26-201ENST00000520756 302 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AC021483.2-201ENST00000567415 758 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AC006065.6-201ENST00000625201 545 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 MTND5P12-201ENST00000502851 1449 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 Z95327.2-201ENST00000414579 1873 ntBASIC4.09□□□□□ -1.75
CCDC88CQ9P219 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC88CQ9P219 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AL132656.3-201ENST00000606384 1595 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 BTBD10P1-201ENST00000549824 1352 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC016588.2-201ENST00000632484 3021 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 VN1R8P-201ENST00000407739 893 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 EIF4A1P3-201ENST00000411521 244 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 GAPDHP49-201ENST00000421421 961 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 PTMAP3-201ENST00000447474 330 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AL935212.3-201ENST00000450729 284 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 RPL7P22-201ENST00000466005 733 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AF213884.1-201ENST00000488102 463 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 RPL7P24-201ENST00000493052 752 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 DPRXP4-201ENST00000578053 568 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 OR7A8P-201ENST00000595427 913 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AL139041.1-201ENST00000605480 610 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC090506.2-201ENST00000624521 419 ntBASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC88CQ9P219 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 RNU1-94P-201ENST00000362627 173 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 SNORA70C-201ENST00000384538 135 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 MIR1193-201ENST00000408109 78 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 AL132838.2-201ENST00000492041 314 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 KCTD9P2-201ENST00000512203 1013 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 TMEM30CP-203ENST00000637814 1035 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 AC138627.1-204ENST00000641894 765 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 OR51C1P-202ENST00000641159 1444 ntBASIC4.08□□□□□ -1.76
CCDC88CQ9P219 AL929601.4-201ENST00000613011 1341 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms