Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 OR1F2P-201ENST00000570470 933 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 DNAJC19P3-201ENST00000594491 331 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC011458.1-201ENST00000604034 617 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC135178.6-201ENST00000605314 398 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC073137.1-201ENST00000605636 634 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC023813.4-201ENST00000607580 580 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC007204.2-201ENST00000615022 616 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AL133370.2-201ENST00000619934 439 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC019080.5-201ENST00000624891 757 ntBASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NDE1Q9NXR1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 RNU1-15P-201ENST00000353977 144 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 SNORA63.3-201ENST00000362682 132 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 SNORA51.1-201ENST00000363243 140 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 RN7SKP160-201ENST00000363804 340 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 RNU6-650P-201ENST00000365658 111 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 RANP4-201ENST00000413361 655 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 MTND2P15-201ENST00000418575 892 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 ARL2BPP3-201ENST00000421226 480 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 MTCO2P1-201ENST00000424648 477 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AL606490.7-201ENST00000433136 191 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 ELOCP18-201ENST00000434209 337 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AL391987.1-201ENST00000441025 200 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC245517.2-201ENST00000442890 346 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 VN1R32P-201ENST00000452234 905 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 RPL23AP56-201ENST00000460778 453 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC084754.1-201ENST00000463466 464 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC093270.2-201ENST00000486157 792 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 HMGB1P3-201ENST00000502802 616 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC021087.2-201ENST00000504656 1203 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC016550.3-201ENST00000515706 767 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 RN7SKP34-201ENST00000516142 244 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC103833.1-201ENST00000517442 172 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 IGHV3-63-201ENST00000518422 341 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AP003102.1-201ENST00000525638 661 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 MTND5P21-201ENST00000531961 522 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 OSBPL9P3-201ENST00000534523 595 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 SULT1C2P2-201ENST00000562517 294 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC005242.1-201ENST00000585658 438 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC011445.2-201ENST00000599274 173 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 BNIP3P31-201ENST00000604515 566 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC242628.1-201ENST00000606810 391 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC004775.1-201ENST00000607389 753 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC120053.1-201ENST00000607706 736 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AP001521.2-201ENST00000608772 546 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AL031666.3-201ENST00000609320 1006 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AL391834.1-201ENST00000609609 560 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC007497.1-201ENST00000610421 561 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC095038.2-201ENST00000621464 1070 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC097460.3-201ENST00000623099 442 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 AC074029.4-201ENST00000624796 1859 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NDE1Q9NXR1 IQCB2P-201ENST00000401788 1633 ntBASIC4.43□□□□□ -1.7
NDE1Q9NXR1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NDE1Q9NXR1 AC018529.3-201ENST00000624212 2254 ntBASIC4.42□□□□□ -1.7
NDE1Q9NXR1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms