Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 AC133552.1-201ENST00000569988 4007 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.65□□□□□ -1.82
LITAFQ99732 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
LITAFQ99732 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LITAFQ99732 AL353743.4-201ENST00000422653 1547 ntBASIC3.65□□□□□ -1.82
LITAFQ99732 MTND4P26-201ENST00000415971 1359 ntBASIC3.65□□□□□ -1.82
LITAFQ99732 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
LITAFQ99732 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC3.65□□□□□ -1.82
LITAFQ99732 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LITAFQ99732 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LITAFQ99732 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
LITAFQ99732 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
LITAFQ99732 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LITAFQ99732 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC3.65□□□□□ -1.82
LITAFQ99732 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LITAFQ99732 OR9G4-201ENST00000302957 984 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LITAFQ99732 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 RNU6-500P-201ENST00000362349 107 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC092634.1-201ENST00000366505 199 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 OR5H15-201ENST00000383696 930 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 Y_RNA.553-201ENST00000384670 102 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 AL078599.1-201ENST00000402075 293 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.65□□□□□ -1.83
LITAFQ99732 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC006509.1-201ENST00000420788 634 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC124944.2-201ENST00000429866 1242 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 MTCYBP39-201ENST00000437562 491 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AL035551.1-201ENST00000446931 348 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AL034418.1-201ENST00000448675 860 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 PRELID1P3-201ENST00000450055 643 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.65□□□□□ -1.83
LITAFQ99732 AL450023.1-201ENST00000450868 751 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 GEMIN2P1-201ENST00000454246 752 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AL133244.1-201ENST00000456007 258 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC3.65□□□□□ -1.83
LITAFQ99732 RN7SL655P-201ENST00000486087 298 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 RPS27P23-201ENST00000487608 251 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC009567.2-201ENST00000502989 349 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 MTATP6P22-201ENST00000507369 598 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 HMGB3P16-201ENST00000508037 287 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC091965.2-201ENST00000512324 613 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 OSTC-204ENST00000512478 663 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 TCP11X3P-202ENST00000514289 1254 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 RNA5SP135-201ENST00000517019 125 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LITAFQ99732 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LITAFQ99732 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC022880.1-201ENST00000534017 973 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.65□□□□□ -1.83
LITAFQ99732 HSPE1P2-201ENST00000554777 306 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.65□□□□□ -1.83
LITAFQ99732 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.65□□□□□ -1.83
LITAFQ99732 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 ROCK1P1-201ENST00000573767 549 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC011840.5-201ENST00000582125 771 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC008759.1-201ENST00000589783 983 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.65□□□□□ -1.83
LITAFQ99732 AC006270.3-201ENST00000605967 1036 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC3.65□□□□□ -1.83
LITAFQ99732 AC244107.2-201ENST00000611773 76 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms