Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MIR1179-201ENST00000408703 91 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 OR51A6P-201ENST00000418680 1004 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 AL162388.1-201ENST00000450912 352 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 RAD23BP3-201ENST00000454157 1152 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 RPL23AP2-201ENST00000471227 466 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 AC010374.1-201ENST00000503762 1237 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 AC084783.1-201ENST00000565846 910 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 AL354984.3-201ENST00000604803 325 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 uc_338.13-201ENST00000618243 179 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 AC074276.2-201ENST00000619891 348 ntBASIC4.57□□□□□ -1.68
CCDC42Q96M95 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC42Q96M95 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC42Q96M95 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC42Q96M95 AL356489.2-201ENST00000566968 3528 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 OR5P1P-201ENST00000299512 925 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 MIR331-201ENST00000362302 94 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 RNU6-1320P-201ENST00000390838 107 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 RNU6-1269P-201ENST00000391139 107 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 SNORA11F-201ENST00000408237 128 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 AP000357.1-201ENST00000409926 1165 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 RNA5SP306-201ENST00000411087 107 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 TMSB10P2-201ENST00000416049 131 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC106901.1-201ENST00000425086 698 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 NFYAP1-201ENST00000431953 972 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC104306.1-201ENST00000449702 371 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 AL451050.1-201ENST00000450126 415 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 RPL23AP81-201ENST00000455252 467 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 RNU6-599P-201ENST00000459383 107 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 RNU6-1193P-201ENST00000459461 107 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC063950.1-201ENST00000552036 308 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 HMGB3P26-201ENST00000560051 582 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC044860.2-201ENST00000561005 179 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC008782.1-201ENST00000603386 430 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC115286.1-201ENST00000604298 434 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 RNU6-368P-201ENST00000620928 107 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 RNU6-538P-201ENST00000622329 107 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 AC021106.3-201ENST00000623925 531 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 RAD17P1-201ENST00000418130 2042 ntBASIC4.56□□□□□ -1.68
CCDC42Q96M95 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC42Q96M95 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC42Q96M95 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC42Q96M95 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC42Q96M95 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 RNA5SP332-201ENST00000391063 115 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 RNA5SP39-201ENST00000411245 120 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 LYPLA1P1-201ENST00000434514 622 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 PTMAP6-201ENST00000439110 327 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 AL512326.1-201ENST00000443050 721 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 RN7SL177P-201ENST00000476596 299 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 MIR4270-201ENST00000581799 70 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC42Q96M95 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC42Q96M95 AC008013.2-202ENST00000637965 364 ntBASIC4.55□□□□□ -1.68
CCDC42Q96M95 CASC19-222ENST00000641321 1173 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms