Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR323A-201ENST00000362199 86 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 RNA5SP167-201ENST00000365461 116 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.22□□□□□ -1.89
CKS1BP61024 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.22□□□□□ -1.89
CKS1BP61024 AL513325.1-201ENST00000417716 1034 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 AL049610.1-201ENST00000423374 372 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 RPL30P3-201ENST00000424262 333 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AL138799.3-201ENST00000438968 350 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.22□□□□□ -1.89
CKS1BP61024 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 RPS26P41-201ENST00000450370 284 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.22□□□□□ -1.89
CKS1BP61024 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CKS1BP61024 AC097484.1-201ENST00000471148 389 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 RPL7AP6-201ENST00000477943 801 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 RN7SL741P-201ENST00000482473 289 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 PPIAP19-201ENST00000486414 492 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 HMGN2P25-201ENST00000486956 268 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.22□□□□□ -1.89
CKS1BP61024 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.22□□□□□ -1.89
CKS1BP61024 AC004825.1-201ENST00000555068 586 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CKS1BP61024 AC006270.2-201ENST00000578523 652 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.22□□□□□ -1.89
CKS1BP61024 BMS1P7-201ENST00000602440 1052 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AC008966.2-201ENST00000606157 453 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AC092653.1-201ENST00000608509 531 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 RNA5SP440-201ENST00000612665 119 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AC004477.3-201ENST00000614061 590 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 AC087821.1-201ENST00000623639 567 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.22□□□□□ -1.89
CKS1BP61024 AC138649.5-201ENST00000637456 137 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CKS1BP61024 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.22□□□□□ -1.89
CKS1BP61024 GABPAP-201ENST00000419271 1356 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CKS1BP61024 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.22□□□□□ -1.89
CKS1BP61024 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CKS1BP61024 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.89
CKS1BP61024 AF127577.6-201ENST00000623352 2191 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CKS1BP61024 NOL8P1-201ENST00000508336 3529 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 RNU6-1331P-201ENST00000363658 106 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 MIR621-201ENST00000384919 96 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 MIR143-201ENST00000385300 106 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AL031985.1-201ENST00000392713 418 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 DUTP5-201ENST00000406790 469 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.21□□□□□ -1.9
CKS1BP61024 AC007390.1-201ENST00000415722 356 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.21□□□□□ -1.9
CKS1BP61024 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 TBCAP2-201ENST00000416175 326 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.21□□□□□ -1.9
CKS1BP61024 RPL24P2-201ENST00000421023 475 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.21□□□□□ -1.9
CKS1BP61024 RPS17P8-201ENST00000434525 335 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CKS1BP61024 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.21□□□□□ -1.9
CKS1BP61024 NDUFA5P8-201ENST00000449019 346 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 HMGB3P22-202ENST00000451823 572 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 RPL7P48-201ENST00000461513 746 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 RN7SL717P-201ENST00000478343 297 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.21□□□□□ -1.9
CKS1BP61024 RN7SL97P-201ENST00000486780 299 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC108693.1-201ENST00000496068 432 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CKS1BP61024 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.21□□□□□ -1.9
CKS1BP61024 MTCO1P30-201ENST00000515244 580 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC008694.2-201ENST00000517591 306 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 NARSP2-201ENST00000518524 679 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.21□□□□□ -1.9
CKS1BP61024 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.21□□□□□ -1.9
CKS1BP61024 HIGD1AP10-201ENST00000527837 282 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.21□□□□□ -1.9
CKS1BP61024 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.21□□□□□ -1.9
CKS1BP61024 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.21□□□□□ -1.9
CKS1BP61024 CYP4A43P-201ENST00000568156 121 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.21□□□□□ -1.9
CKS1BP61024 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.21□□□□□ -1.9
CKS1BP61024 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.21□□□□□ -1.9
CKS1BP61024 AC022146.1-201ENST00000595307 847 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC006254.3-201ENST00000603353 884 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 GMCL1P2-201ENST00000605230 823 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 MIR6778-201ENST00000617912 73 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.21□□□□□ -1.9
CKS1BP61024 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CKS1BP61024 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.21□□□□□ -1.9
CKS1BP61024 AL118496.1-201ENST00000440201 1812 ntBASIC3.21□□□□□ -1.9
CKS1BP61024 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.21□□□□□ -1.9
CKS1BP61024 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CKS1BP61024 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CKS1BP61024 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms