Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.27□□□□□ -1.73
VSX2P58304 AC090948.1-201ENST00000607464 549 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.27□□□□□ -1.73
VSX2P58304 SNX18P1Y-201ENST00000616231 511 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC005086.4-201ENST00000623065 213 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VSX2P58304 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VSX2P58304 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VSX2P58304 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 AC091046.3-201ENST00000631455 1574 ntBASIC4.27□□□□□ -1.73
VSX2P58304 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.27□□□□□ -1.73
VSX2P58304 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VSX2P58304 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VSX2P58304 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VSX2P58304 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 OR10J6P-201ENST00000289731 930 ntBASIC4.26□□□□□ -1.73
VSX2P58304 RNU1-130P-201ENST00000363930 160 ntBASIC4.26□□□□□ -1.73
VSX2P58304 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
VSX2P58304 ATP5F1P2-201ENST00000398143 760 ntBASIC4.26□□□□□ -1.73
VSX2P58304 SEPT7P8-201ENST00000413308 775 ntBASIC4.26□□□□□ -1.73
VSX2P58304 AC009237.10-201ENST00000414112 510 ntBASIC4.26□□□□□ -1.73
VSX2P58304 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.26□□□□□ -1.73
VSX2P58304 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.26□□□□□ -1.73
VSX2P58304 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.26□□□□□ -1.73
VSX2P58304 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.26□□□□□ -1.73
VSX2P58304 RPL12P34-201ENST00000424532 479 ntBASIC4.26□□□□□ -1.73
VSX2P58304 RPL21P91-201ENST00000429231 479 ntBASIC4.26□□□□□ -1.73
VSX2P58304 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 RPL23AP25-201ENST00000430973 463 ntBASIC4.26□□□□□ -1.73
VSX2P58304 OR6C72P-201ENST00000451403 892 ntBASIC4.26□□□□□ -1.73
VSX2P58304 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 RPL23AP24-201ENST00000458203 385 ntBASIC4.26□□□□□ -1.73
VSX2P58304 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VSX2P58304 STMN1P2-201ENST00000508435 439 ntBASIC4.26□□□□□ -1.73
VSX2P58304 AC093840.1-201ENST00000511599 336 ntBASIC4.26□□□□□ -1.73
VSX2P58304 RNA5SP497-201ENST00000516081 97 ntBASIC4.26□□□□□ -1.73
VSX2P58304 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.26□□□□□ -1.73
VSX2P58304 AC018442.3-201ENST00000523025 183 ntBASIC4.26□□□□□ -1.73
VSX2P58304 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VSX2P58304 AC122134.1-201ENST00000565664 1104 ntBASIC4.26□□□□□ -1.73
VSX2P58304 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 HMGB2P1-201ENST00000591146 634 ntBASIC4.26□□□□□ -1.73
VSX2P58304 AC091905.2-201ENST00000623143 306 ntBASIC4.26□□□□□ -1.73
VSX2P58304 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.26□□□□□ -1.73
VSX2P58304 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VSX2P58304 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VSX2P58304 AC017104.4-201ENST00000636283 1592 ntBASIC4.26□□□□□ -1.73
VSX2P58304 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VSX2P58304 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VSX2P58304 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VSX2P58304 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.26□□□□□ -1.73
VSX2P58304 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VSX2P58304 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VSX2P58304 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.25□□□□□ -1.73
VSX2P58304 RNU1-63P-201ENST00000383902 164 ntBASIC4.25□□□□□ -1.73
VSX2P58304 MIR195-201ENST00000385194 87 ntBASIC4.25□□□□□ -1.73
VSX2P58304 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.25□□□□□ -1.73
VSX2P58304 MIR921-201ENST00000401133 56 ntBASIC4.25□□□□□ -1.73
VSX2P58304 HDGFP1-201ENST00000405943 252 ntBASIC4.25□□□□□ -1.73
VSX2P58304 EIF4A1P3-201ENST00000411521 244 ntBASIC4.25□□□□□ -1.73
VSX2P58304 RAB9AP4-201ENST00000415230 609 ntBASIC4.25□□□□□ -1.73
VSX2P58304 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.25□□□□□ -1.73
VSX2P58304 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.25□□□□□ -1.73
VSX2P58304 AC092017.2-201ENST00000427600 362 ntBASIC4.25□□□□□ -1.73
VSX2P58304 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.25□□□□□ -1.73
VSX2P58304 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VSX2P58304 AC073143.1-201ENST00000436316 395 ntBASIC4.25□□□□□ -1.73
VSX2P58304 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.25□□□□□ -1.73
VSX2P58304 TPT1P12-201ENST00000448968 492 ntBASIC4.25□□□□□ -1.73
VSX2P58304 AC107015.1-201ENST00000466902 747 ntBASIC4.25□□□□□ -1.73
VSX2P58304 AC011276.1-201ENST00000469688 323 ntBASIC4.25□□□□□ -1.73
VSX2P58304 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.25□□□□□ -1.73
VSX2P58304 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.25□□□□□ -1.73
VSX2P58304 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.25□□□□□ -1.73
VSX2P58304 MTCO3P42-201ENST00000509488 518 ntBASIC4.25□□□□□ -1.73
VSX2P58304 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.25□□□□□ -1.73
VSX2P58304 MTCO3P39-201ENST00000514812 518 ntBASIC4.25□□□□□ -1.73
VSX2P58304 NPM1P6-201ENST00000521088 871 ntBASIC4.25□□□□□ -1.73
VSX2P58304 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.25□□□□□ -1.73
VSX2P58304 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VSX2P58304 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.25□□□□□ -1.73
VSX2P58304 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.25□□□□□ -1.73
VSX2P58304 AC090181.2-201ENST00000602975 672 ntBASIC4.25□□□□□ -1.73
VSX2P58304 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.25□□□□□ -1.73
VSX2P58304 AC091979.2-201ENST00000607514 214 ntBASIC4.25□□□□□ -1.73
VSX2P58304 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.25□□□□□ -1.73
VSX2P58304 AL731566.2-201ENST00000618971 317 ntBASIC4.25□□□□□ -1.73
VSX2P58304 AP002967.1-201ENST00000624203 539 ntBASIC4.25□□□□□ -1.73
VSX2P58304 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VSX2P58304 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms