Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FAM27D1-201ENST00000612308 341 ntBASIC5.61□□□□□ -1.51
RIPK4P57078 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.61□□□□□ -1.51
RIPK4P57078 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RIPK4P57078 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.61□□□□□ -1.51
RIPK4P57078 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RIPK4P57078 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.61□□□□□ -1.51
RIPK4P57078 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIPK4P57078 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.6□□□□□ -1.51
RIPK4P57078 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIPK4P57078 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIPK4P57078 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.6□□□□□ -1.51
RIPK4P57078 NEAT1-202ENST00000501122 22743 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RIPK4P57078 LARP1BP1-201ENST00000506036 1359 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 MIR383-201ENST00000362257 73 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RIPK4P57078 AMZ2P2-201ENST00000406819 1057 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.6□□□□□ -1.51
RIPK4P57078 UBTFL3-201ENST00000418934 1024 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 AC004448.2-201ENST00000422360 586 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 ARL4AP3-201ENST00000441452 574 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 ABCF2P2-201ENST00000450549 296 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.6□□□□□ -1.51
RIPK4P57078 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RIPK4P57078 UBTFL6-201ENST00000477929 1024 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 AC104164.2-201ENST00000496953 495 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 STMN1P2-201ENST00000508435 439 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 AL592156.1-201ENST00000508758 304 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIPK4P57078 SNORA31.9-201ENST00000516429 84 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.6□□□□□ -1.51
RIPK4P57078 AC025884.1-201ENST00000556034 378 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.6□□□□□ -1.51
RIPK4P57078 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.6□□□□□ -1.51
RIPK4P57078 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.6□□□□□ -1.51
RIPK4P57078 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.6□□□□□ -1.51
RIPK4P57078 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
RIPK4P57078 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RIPK4P57078 AC091046.3-201ENST00000631455 1574 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RIPK4P57078 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.59□□□□□ -1.51
RIPK4P57078 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIPK4P57078 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIPK4P57078 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIPK4P57078 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
RIPK4P57078 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIPK4P57078 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIPK4P57078 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.59□□□□□ -1.51
RIPK4P57078 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.59□□□□□ -1.51
RIPK4P57078 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.59□□□□□ -1.51
RIPK4P57078 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.59□□□□□ -1.51
RIPK4P57078 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.59□□□□□ -1.51
RIPK4P57078 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.59□□□□□ -1.51
RIPK4P57078 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIPK4P57078 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.59□□□□□ -1.51
RIPK4P57078 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.59□□□□□ -1.51
RIPK4P57078 IGKV2D-10-201ENST00000520194 281 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.59□□□□□ -1.51
RIPK4P57078 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.59□□□□□ -1.51
RIPK4P57078 AC136624.4-201ENST00000573044 370 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 MIR4675-201ENST00000577898 77 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.59□□□□□ -1.51
RIPK4P57078 AC015813.4-201ENST00000610469 179 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.59□□□□□ -1.51
RIPK4P57078 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.59□□□□□ -1.51
RIPK4P57078 AC092435.4-201ENST00000623012 4159 ntBASIC5.59□□□□□ -1.51
RIPK4P57078 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIPK4P57078 MAPK10-320ENST00000641462 6696 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 MAPK10-304ENST00000641341 3984 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIPK4P57078 AC009951.1-201ENST00000623674 2614 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIPK4P57078 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIPK4P57078 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIPK4P57078 AC136624.1-201ENST00000400791 413 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 RPS27AP11-201ENST00000402798 447 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.58□□□□□ -1.52
RIPK4P57078 RPS20P4-201ENST00000461659 355 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 AC010469.1-201ENST00000463864 576 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 RN7SL41P-201ENST00000476144 297 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.58□□□□□ -1.52
RIPK4P57078 PGBD4P4-201ENST00000509673 613 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 MRPL49P2-201ENST00000521066 465 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 PHBP17-201ENST00000528576 541 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 DYNLL1P4-201ENST00000549314 266 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.58□□□□□ -1.52
RIPK4P57078 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.58□□□□□ -1.52
RIPK4P57078 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.58□□□□□ -1.52
RIPK4P57078 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RIPK4P57078 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.58□□□□□ -1.52
RIPK4P57078 LINC00901.1-201ENST00000617252 152 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RIPK4P57078 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RIPK4P57078 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIPK4P57078 AC018529.3-201ENST00000624212 2254 ntBASIC5.58□□□□□ -1.52
RIPK4P57078 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.57□□□□□ -1.52
RIPK4P57078 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
RIPK4P57078 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms