Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKNOX1P55347 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.33□□□□□ -1.72
PKNOX1P55347 RARSP1-201ENST00000542842 1418 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PKNOX1P55347 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PKNOX1P55347 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PKNOX1P55347 RNU1-15P-201ENST00000353977 144 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.33□□□□□ -1.72
PKNOX1P55347 RHOT1P2-201ENST00000366423 333 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKNOX1P55347 MIR93-201ENST00000385024 80 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 MT-TP-201ENST00000387461 68 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AL034403.1-201ENST00000399414 885 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 MIR298-201ENST00000401212 88 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PKNOX1P55347 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.33□□□□□ -1.72
PKNOX1P55347 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKNOX1P55347 VN1R54P-201ENST00000435210 1049 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 RPL23AP43-201ENST00000446445 471 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.33□□□□□ -1.72
PKNOX1P55347 RNU6-775P-201ENST00000459318 96 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AC079804.1-201ENST00000461922 436 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 OR5M14P-201ENST00000506803 618 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 OR51K1P-201ENST00000510214 950 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.33□□□□□ -1.72
PKNOX1P55347 MYL12AP1-201ENST00000518490 515 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AC104997.1-201ENST00000519761 717 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 IFITM8P-201ENST00000522529 394 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.33□□□□□ -1.72
PKNOX1P55347 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.33□□□□□ -1.72
PKNOX1P55347 CYP4A43P-201ENST00000568156 121 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AC090312.1-201ENST00000580637 348 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 Z98200.1-201ENST00000607298 470 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AL133370.2-201ENST00000619934 439 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AC018445.2-201ENST00000622987 260 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 AC015908.5-201ENST00000623289 343 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.33□□□□□ -1.72
PKNOX1P55347 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.33□□□□□ -1.72
PKNOX1P55347 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.33□□□□□ -1.72
PKNOX1P55347 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.33□□□□□ -1.72
PKNOX1P55347 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKNOX1P55347 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
PKNOX1P55347 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PKNOX1P55347 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.33□□□□□ -1.72
PKNOX1P55347 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.32□□□□□ -1.72
PKNOX1P55347 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKNOX1P55347 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKNOX1P55347 AC010928.1-201ENST00000592477 1447 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKNOX1P55347 AL133243.3-201ENST00000617415 3004 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PKNOX1P55347 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
PKNOX1P55347 RNU6-819P-201ENST00000364116 107 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PKNOX1P55347 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 MIR708-201ENST00000390708 88 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 RNA5SP397-201ENST00000391323 118 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.32□□□□□ -1.72
PKNOX1P55347 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKNOX1P55347 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.32□□□□□ -1.72
PKNOX1P55347 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AC004552.1-201ENST00000419089 348 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.32□□□□□ -1.72
PKNOX1P55347 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.32□□□□□ -1.72
PKNOX1P55347 RPL10P17-201ENST00000453852 316 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 RPS3AP41-201ENST00000462701 778 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 RPS26P3-201ENST00000470205 348 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AC090543.2-201ENST00000483963 348 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AC004057.1-201ENST00000485827 348 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 NDUFB5P1-201ENST00000508134 564 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AP001922.4-201ENST00000526967 290 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 MIR3934-201ENST00000579806 107 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AL139395.1-201ENST00000603662 160 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.32□□□□□ -1.72
PKNOX1P55347 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AC019131.2-201ENST00000609071 870 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 AL031666.3-201ENST00000609320 1006 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 MIR7155-201ENST00000615925 56 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.32□□□□□ -1.72
PKNOX1P55347 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.32□□□□□ -1.72
PKNOX1P55347 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.32□□□□□ -1.72
PKNOX1P55347 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKNOX1P55347 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PKNOX1P55347 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.32□□□□□ -1.72
PKNOX1P55347 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.32□□□□□ -1.72
PKNOX1P55347 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms