Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.05□□□□□ -1.44
CPS1P31327 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CPS1P31327 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CPS1P31327 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CPS1P31327 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CPS1P31327 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CPS1P31327 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CPS1P31327 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CPS1P31327 OR4A15-201ENST00000314706 1035 ntBASIC6.04□□□□□ -1.44
CPS1P31327 OR11H4-201ENST00000315409 1082 ntBASIC6.04□□□□□ -1.44
CPS1P31327 RPS20P14-201ENST00000412545 360 ntBASIC6.04□□□□□ -1.44
CPS1P31327 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CPS1P31327 AL451050.1-201ENST00000450126 415 ntBASIC6.04□□□□□ -1.44
CPS1P31327 DDX39BP2-208ENST00000453923 258 ntBASIC6.04□□□□□ -1.44
CPS1P31327 PPP1R11P1-201ENST00000486095 376 ntBASIC6.04□□□□□ -1.44
CPS1P31327 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.04□□□□□ -1.44
CPS1P31327 RNA5SP73-201ENST00000516744 108 ntBASIC6.04□□□□□ -1.44
CPS1P31327 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.04□□□□□ -1.44
CPS1P31327 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.04□□□□□ -1.44
CPS1P31327 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.04□□□□□ -1.44
CPS1P31327 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.04□□□□□ -1.44
CPS1P31327 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CPS1P31327 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.04□□□□□ -1.44
CPS1P31327 VPS35P1-201ENST00000563400 1518 ntBASIC6.04□□□□□ -1.44
CPS1P31327 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CPS1P31327 AL049781.1-201ENST00000623195 3585 ntBASIC6.04□□□□□ -1.44
CPS1P31327 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CPS1P31327 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.04□□□□□ -1.44
CPS1P31327 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.04□□□□□ -1.44
CPS1P31327 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.04□□□□□ -1.44
CPS1P31327 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.04□□□□□ -1.44
CPS1P31327 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.04□□□□□ -1.44
CPS1P31327 RN7SKP141-201ENST00000516167 338 ntBASIC6.04□□□□□ -1.44
CPS1P31327 RNA5SP360-201ENST00000516555 118 ntBASIC6.04□□□□□ -1.44
CPS1P31327 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.04□□□□□ -1.44
CPS1P31327 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.04□□□□□ -1.44
CPS1P31327 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.04□□□□□ -1.44
CPS1P31327 AC007546.2-201ENST00000623996 360 ntBASIC6.04□□□□□ -1.44
CPS1P31327 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CPS1P31327 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CPS1P31327 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CPS1P31327 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CPS1P31327 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.03□□□□□ -1.44
CPS1P31327 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.03□□□□□ -1.44
CPS1P31327 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.03□□□□□ -1.44
CPS1P31327 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.03□□□□□ -1.44
CPS1P31327 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.03□□□□□ -1.44
CPS1P31327 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.03□□□□□ -1.44
CPS1P31327 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CPS1P31327 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.03□□□□□ -1.44
CPS1P31327 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.03□□□□□ -1.44
CPS1P31327 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.03□□□□□ -1.44
CPS1P31327 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 U8.11-201ENST00000384699 133 ntBASIC6.03□□□□□ -1.44
CPS1P31327 U8.12-201ENST00000384701 133 ntBASIC6.03□□□□□ -1.44
CPS1P31327 HIST1H2APS3-201ENST00000403259 134 ntBASIC6.03□□□□□ -1.44
CPS1P31327 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 AL133244.1-201ENST00000456007 258 ntBASIC6.03□□□□□ -1.44
CPS1P31327 U8.18-201ENST00000459285 133 ntBASIC6.03□□□□□ -1.44
CPS1P31327 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.03□□□□□ -1.44
CPS1P31327 AL358832.1-201ENST00000497800 389 ntBASIC6.03□□□□□ -1.44
CPS1P31327 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.03□□□□□ -1.44
CPS1P31327 AC015722.2-201ENST00000622210 551 ntBASIC6.03□□□□□ -1.44
CPS1P31327 AL034408.1-202ENST00000636088 415 ntBASIC6.03□□□□□ -1.44
CPS1P31327 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CPS1P31327 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.44
CPS1P31327 AC068870.3-201ENST00000625077 2536 ntBASIC6.02□□□□□ -1.45
CPS1P31327 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.02□□□□□ -1.45
CPS1P31327 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.02□□□□□ -1.45
CPS1P31327 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.02□□□□□ -1.45
CPS1P31327 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CPS1P31327 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CPS1P31327 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CPS1P31327 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CPS1P31327 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.02□□□□□ -1.45
CPS1P31327 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CPS1P31327 NPM1P34-201ENST00000428821 893 ntBASIC6.02□□□□□ -1.45
CPS1P31327 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.02□□□□□ -1.45
CPS1P31327 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.02□□□□□ -1.45
CPS1P31327 AC110792.1-201ENST00000491826 472 ntBASIC6.02□□□□□ -1.45
CPS1P31327 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.02□□□□□ -1.45
CPS1P31327 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CPS1P31327 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.02□□□□□ -1.45
CPS1P31327 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.02□□□□□ -1.45
CPS1P31327 Z98200.1-201ENST00000607298 470 ntBASIC6.02□□□□□ -1.45
CPS1P31327 PCNP-208ENST00000627393 136 ntTSL 2 BASIC6.02□□□□□ -1.45
CPS1P31327 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CPS1P31327 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CPS1P31327 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CPS1P31327 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CPS1P31327 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CPS1P31327 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.01□□□□□ -1.45
CPS1P31327 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.01□□□□□ -1.45
CPS1P31327 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.01□□□□□ -1.45
CPS1P31327 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms