Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL133384.1-201ENST00000412744 351 ntBASIC7.15□□□□□ -1.26
RFX1P22670 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.15□□□□□ -1.26
RFX1P22670 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 AC245054.1-201ENST00000420944 258 ntBASIC7.15□□□□□ -1.26
RFX1P22670 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 PIGFP2-201ENST00000421400 651 ntBASIC7.15□□□□□ -1.26
RFX1P22670 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 NANOGP6-201ENST00000429190 847 ntBASIC7.15□□□□□ -1.26
RFX1P22670 LDHAP2-201ENST00000437325 985 ntBASIC7.15□□□□□ -1.26
RFX1P22670 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.15□□□□□ -1.26
RFX1P22670 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.15□□□□□ -1.26
RFX1P22670 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.15□□□□□ -1.26
RFX1P22670 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.15□□□□□ -1.26
RFX1P22670 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 AC092824.1-201ENST00000483524 576 ntBASIC7.15□□□□□ -1.26
RFX1P22670 FAM172BP-201ENST00000487497 1089 ntBASIC7.15□□□□□ -1.26
RFX1P22670 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.15□□□□□ -1.26
RFX1P22670 AC046134.1-201ENST00000514454 666 ntBASIC7.15□□□□□ -1.26
RFX1P22670 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC7.15□□□□□ -1.26
RFX1P22670 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.15□□□□□ -1.26
RFX1P22670 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.15□□□□□ -1.26
RFX1P22670 AL162632.2-201ENST00000553933 399 ntBASIC7.15□□□□□ -1.26
RFX1P22670 AL157687.1-201ENST00000554853 619 ntBASIC7.15□□□□□ -1.26
RFX1P22670 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 AC002310.3-201ENST00000569728 723 ntBASIC7.15□□□□□ -1.26
RFX1P22670 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 AC005730.3-201ENST00000583067 366 ntBASIC7.15□□□□□ -1.26
RFX1P22670 TPMTP1-201ENST00000592307 737 ntBASIC7.15□□□□□ -1.26
RFX1P22670 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.15□□□□□ -1.26
RFX1P22670 AC008277.2-201ENST00000605196 797 ntBASIC7.15□□□□□ -1.26
RFX1P22670 AL365503.1-201ENST00000605247 905 ntBASIC7.15□□□□□ -1.26
RFX1P22670 AC068726.1-201ENST00000610993 341 ntBASIC7.15□□□□□ -1.26
RFX1P22670 AC068880.5-201ENST00000624331 290 ntBASIC7.15□□□□□ -1.26
RFX1P22670 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.15□□□□□ -1.26
RFX1P22670 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RFX1P22670 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.15□□□□□ -1.26
RFX1P22670 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
RFX1P22670 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
RFX1P22670 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RFX1P22670 AC005618.1-201ENST00000606901 3148 ntBASIC7.15□□□□□ -1.27
RFX1P22670 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
RFX1P22670 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.15□□□□□ -1.27
RFX1P22670 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.15□□□□□ -1.27
RFX1P22670 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.15□□□□□ -1.27
RFX1P22670 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RFX1P22670 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
RFX1P22670 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.14□□□□□ -1.27
RFX1P22670 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.14□□□□□ -1.27
RFX1P22670 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 RNA5SP321-201ENST00000362722 111 ntBASIC7.14□□□□□ -1.27
RFX1P22670 RNU6-777P-201ENST00000364265 104 ntBASIC7.14□□□□□ -1.27
RFX1P22670 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 RPS3AP36-201ENST00000398190 775 ntBASIC7.14□□□□□ -1.27
RFX1P22670 PRELID1P1-201ENST00000403549 660 ntBASIC7.14□□□□□ -1.27
RFX1P22670 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.14□□□□□ -1.27
RFX1P22670 AL359092.1-201ENST00000417156 265 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
RFX1P22670 AC012498.1-201ENST00000424037 437 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 AL451074.3-201ENST00000437709 472 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 GAPDHP37-201ENST00000442317 968 ntBASIC7.14□□□□□ -1.27
RFX1P22670 Z82190.1-201ENST00000454534 490 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC023598.1-201ENST00000472521 361 ntBASIC7.14□□□□□ -1.27
RFX1P22670 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 AC012170.1-201ENST00000495139 359 ntBASIC7.14□□□□□ -1.27
RFX1P22670 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 MTND4P29-201ENST00000503122 1372 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC112484.3-201ENST00000505910 329 ntBASIC7.14□□□□□ -1.27
RFX1P22670 ARL4AP2-201ENST00000507378 601 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC024589.1-201ENST00000512207 263 ntBASIC7.14□□□□□ -1.27
RFX1P22670 RNU6-507P-201ENST00000516045 100 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 AC084121.1-201ENST00000533882 835 ntBASIC7.14□□□□□ -1.27
RFX1P22670 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.14□□□□□ -1.27
RFX1P22670 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms