Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 MIR383-201ENST00000362257 73 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 COX6B1P7-201ENST00000430845 235 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 BTF3P10-201ENST00000433415 495 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 RPL23AP89-201ENST00000439324 255 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC109327.1-201ENST00000471666 403 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC091167.1-201ENST00000492017 396 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 IFITM8P-201ENST00000522529 394 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC063950.1-201ENST00000552036 308 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC022655.2-201ENST00000577280 318 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AL139041.1-201ENST00000605480 610 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AL445423.1-201ENST00000609941 536 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC074140.1-201ENST00000621617 208 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC020763.5-201ENST00000623298 430 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC010435.1-201ENST00000623353 1177 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 MIR3653-201ENST00000625572 110 ntBASIC4.26□□□□□ -1.73
HLA-DQB2P05538 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AL607077.1-201ENST00000401718 499 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AL035696.2-201ENST00000407941 709 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 RN7SKP182-201ENST00000410772 298 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AC004690.1-201ENST00000418216 328 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 RNU7-157P-201ENST00000459600 66 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 UQCRHP4-201ENST00000471686 272 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 RN7SL481P-201ENST00000477764 299 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AC106806.2-201ENST00000509365 500 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 PARP4P3-201ENST00000510265 317 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 RN7SL176P-201ENST00000580352 264 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 KPNA2P3-201ENST00000584190 848 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 IPO5P1-202ENST00000600039 287 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 ARF4P1-201ENST00000605447 541 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AL023583.1-201ENST00000607518 1143 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 LARP1BP1-201ENST00000506036 1359 ntBASIC4.25□□□□□ -1.73
HLA-DQB2P05538 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
HLA-DQB2P05538 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AL133243.3-201ENST00000617415 3004 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 OR6C69P-201ENST00000394268 893 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC016397.1-201ENST00000412463 242 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 EIF4EP1-201ENST00000422311 642 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 RPL23AP46-201ENST00000438548 490 ntBASIC4.24□□□□□ -1.73
HLA-DQB2P05538 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DQB2P05538 AC009220.1-201ENST00000451614 275 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms