Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL1A1P02452 MUC2-202ENST00000613187 4845 ntBASIC5.11□□□□□ -1.59
COL1A1P02452 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 AP000357.1-201ENST00000409926 1165 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.1□□□□□ -1.59
COL1A1P02452 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.1□□□□□ -1.59
COL1A1P02452 RPS29P7-201ENST00000439662 171 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 AL133547.1-201ENST00000448546 220 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 NPM1P21-201ENST00000513394 762 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.1□□□□□ -1.59
COL1A1P02452 AC124068.1-201ENST00000563131 678 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.1□□□□□ -1.59
COL1A1P02452 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 AC090912.3-201ENST00000609775 533 ntBASIC5.1□□□□□ -1.59
COL1A1P02452 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL1A1P02452 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
COL1A1P02452 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
COL1A1P02452 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.1□□□□□ -1.59
COL1A1P02452 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.09□□□□□ -1.59
COL1A1P02452 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL1A1P02452 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL1A1P02452 RNA5SP387-201ENST00000364226 106 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 RPL23AP25-201ENST00000430973 463 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.09□□□□□ -1.59
COL1A1P02452 CEACAMP1-201ENST00000434624 1035 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 PPIAP13-201ENST00000434706 478 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.09□□□□□ -1.59
COL1A1P02452 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.09□□□□□ -1.59
COL1A1P02452 RPL7L1P8-201ENST00000469911 741 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
COL1A1P02452 AC010460.1-201ENST00000507087 466 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.09□□□□□ -1.59
COL1A1P02452 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.09□□□□□ -1.59
COL1A1P02452 AL121834.1-201ENST00000572284 509 ntBASIC5.09□□□□□ -1.59
COL1A1P02452 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.09□□□□□ -1.59
COL1A1P02452 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL1A1P02452 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL1A1P02452 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL1A1P02452 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL1A1P02452 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
COL1A1P02452 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL1A1P02452 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL1A1P02452 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COL1A1P02452 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL1A1P02452 VDAC1P9-201ENST00000412766 841 ntBASIC5.08□□□□□ -1.6
COL1A1P02452 OR8F1P-201ENST00000425243 930 ntBASIC5.08□□□□□ -1.6
COL1A1P02452 AC018644.1-201ENST00000429934 551 ntBASIC5.08□□□□□ -1.6
COL1A1P02452 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.08□□□□□ -1.6
COL1A1P02452 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.08□□□□□ -1.6
COL1A1P02452 IFITM8P-201ENST00000522529 394 ntBASIC5.08□□□□□ -1.6
COL1A1P02452 OR4A2P-201ENST00000527276 913 ntBASIC5.08□□□□□ -1.6
COL1A1P02452 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.08□□□□□ -1.6
COL1A1P02452 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.08□□□□□ -1.6
COL1A1P02452 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL1A1P02452 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.08□□□□□ -1.6
COL1A1P02452 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
COL1A1P02452 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
COL1A1P02452 AC092162.3-201ENST00000624511 1624 ntBASIC5.08□□□□□ -1.6
COL1A1P02452 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL1A1P02452 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL1A1P02452 EOGT-210ENST00000615922 1931 ntBASIC5.08□□□□□ -1.6
COL1A1P02452 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL1A1P02452 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL1A1P02452 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
COL1A1P02452 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL1A1P02452 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL1A1P02452 PTMAP2-201ENST00000397627 327 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.07□□□□□ -1.6
COL1A1P02452 AC115285.1-201ENST00000424879 736 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 RPL23AP46-201ENST00000438548 490 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.07□□□□□ -1.6
COL1A1P02452 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.07□□□□□ -1.6
COL1A1P02452 RPS29P19-201ENST00000479709 171 ntBASIC5.07□□□□□ -1.6
COL1A1P02452 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.07□□□□□ -1.6
COL1A1P02452 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.07□□□□□ -1.6
COL1A1P02452 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.07□□□□□ -1.6
COL1A1P02452 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.07□□□□□ -1.6
COL1A1P02452 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.07□□□□□ -1.6
COL1A1P02452 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL1A1P02452 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.07□□□□□ -1.6
COL1A1P02452 AC116667.1-201ENST00000604855 2072 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms