Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 AL138721.1-201ENST00000616756 179 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 MIR7154-201ENST00000620673 73 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 MAPK10-303ENST00000641324 3959 ntBASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NPC1L1Q9UHC9 SNORA37-201ENST00000384504 129 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 SNORA48.7-201ENST00000391302 135 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 VN1R8P-201ENST00000407739 893 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 PDSS1P1-201ENST00000422953 1114 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC079804.1-201ENST00000461922 436 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 UQCRHP4-201ENST00000471686 272 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC108475.1-201ENST00000507880 950 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC099522.1-202ENST00000514718 367 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AL596275.2-204ENST00000641628 552 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AL596275.2-206ENST00000641957 626 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC100871.1-201ENST00000507871 1456 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 MIR1179-201ENST00000408703 91 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 CBX1P3-201ENST00000413296 527 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 RPS27AP12-201ENST00000429552 465 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 RPL7P22-201ENST00000466005 733 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 RPS27AP13-201ENST00000498403 237 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 RNA5SP519-201ENST00000516480 119 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 AL023881.1-201ENST00000621088 301 ntBASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPC1L1Q9UHC9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC116158.1-201ENST00000560231 2129 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 MUC2-202ENST00000613187 4845 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC006971.1-201ENST00000407916 4486 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 LARP1BP1-201ENST00000506036 1359 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 PRELID3BP10-201ENST00000431957 584 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 AC106806.2-201ENST00000509365 500 ntBASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.79□□□□□ -1.48
NPC1L1Q9UHC9 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms