Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 ATP5F1P2-201ENST00000398143 760 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 RPL23AP59-201ENST00000399415 461 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC119751.6-201ENST00000416712 186 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 CYCSP10-201ENST00000417973 294 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC069213.2-201ENST00000420238 366 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AL512326.1-201ENST00000443050 721 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 RPL10P17-201ENST00000453852 316 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 RN7SL809P-201ENST00000482040 297 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC010374.1-201ENST00000503762 1237 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC108145.1-201ENST00000503770 153 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 SULT1C2P2-201ENST00000562517 294 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 RPL12P25-202ENST00000598100 674 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC087468.1-201ENST00000604365 630 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AL354984.3-201ENST00000604803 325 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC113403.1-201ENST00000604910 193 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 MIR432-201ENST00000606207 94 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC007546.1-201ENST00000619452 559 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC079298.2-201ENST00000623885 459 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC025031.4-201ENST00000621248 3271 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AC015813.6-201ENST00000624409 5808 ntBASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 LINC01109-201ENST00000603837 3081 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC011266.1-201ENST00000624119 3569 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AL132640.2-201ENST00000559968 1698 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 OR10J6P-201ENST00000289731 930 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC004690.1-201ENST00000418216 328 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC092570.3-201ENST00000420113 693 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 RPL23AP81-201ENST00000455252 467 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AL133244.1-201ENST00000456007 258 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 MTND2P28-201ENST00000457540 1044 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 RPL7AP28-201ENST00000464513 571 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AK3P4-201ENST00000504283 583 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC111000.3-201ENST00000508057 576 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 IFITM8P-201ENST00000522529 394 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC124068.1-201ENST00000563131 678 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC020915.5-201ENST00000596836 964 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AL023881.1-201ENST00000621088 301 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 AC015908.5-201ENST00000623289 343 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 CUL4AP1-201ENST00000514750 1863 ntBASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS29Q9UBQ0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AC090017.1-201ENST00000548612 1779 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 RNA5SP52-201ENST00000362448 134 ntBASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VPS29Q9UBQ0 AL607077.1-201ENST00000401718 499 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms