Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC091286.1-201ENST00000431233 461 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 CEACAMP1-201ENST00000434624 1035 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC022655.2-201ENST00000577280 318 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AF131215.7-201ENST00000602443 707 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC084757.4-201ENST00000616350 526 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC138965.3-201ENST00000623875 498 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.65□□□□□ -1.5
PHRF1Q9P1Y6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHRF1Q9P1Y6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 HSPE1P12-201ENST00000412576 301 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 ABCF2P2-201ENST00000450549 296 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 NANOGP10-201ENST00000453325 895 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 RN7SKP157-201ENST00000516174 282 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 SNORA74D-201ENST00000516404 141 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 MIR3200-201ENST00000580767 85 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 AC112230.1-201ENST00000604342 547 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 USP9YP4-201ENST00000424401 1745 ntBASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PHRF1Q9P1Y6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 SNORA73.2-201ENST00000364946 201 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 RNU1-44P-201ENST00000384453 163 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 PPIAP13-201ENST00000434706 478 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC110792.1-201ENST00000491826 472 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC090151.1-201ENST00000520784 730 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC007179.3-201ENST00000604976 235 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC243756.2-201ENST00000618406 463 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC015967.1-201ENST00000619893 476 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 AC010266.2-201ENST00000564741 3255 ntBASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHRF1Q9P1Y6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 RN7SKP186-201ENST00000365371 303 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AL078604.1-201ENST00000404609 466 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 RPL7P15-201ENST00000461190 712 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 IGKV2D-19-201ENST00000523346 262 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC006064.5-201ENST00000541782 248 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC015908.5-201ENST00000623289 343 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC009093.8-201ENST00000641769 292 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 MIR1179-201ENST00000408703 91 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC068533.1-201ENST00000418542 415 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 RPL36AP10-201ENST00000421785 322 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 MTCO1P54-201ENST00000430139 712 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 RPL38P1-201ENST00000460914 211 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 BNIP3P41-201ENST00000503774 571 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC110768.1-201ENST00000509222 400 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 YPEL5P3-201ENST00000547227 352 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 MIR5684-201ENST00000585074 65 ntBASIC5.63□□□□□ -1.51
PHRF1Q9P1Y6 SNORA51-201ENST00000606420 132 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms