Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RPL21P7-201ENST00000557463 483 ntBASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 AL138721.1-201ENST00000616756 179 ntBASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 AP001273.1-201ENST00000624493 3152 ntBASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KIAA1549Q9HCM3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 RPL6P29-201ENST00000414863 865 ntBASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 RPS26P2-201ENST00000440331 348 ntBASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 AC009963.2-201ENST00000453431 138 ntBASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 UQCRHP4-201ENST00000471686 272 ntBASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 RPL7P24-201ENST00000493052 752 ntBASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 RNA5SP519-201ENST00000516480 119 ntBASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 ERCC6-202ENST00000374127 1782 ntBASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
KIAA1549Q9HCM3 HSPD1P14-201ENST00000432666 1618 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 OR6C64P-201ENST00000419708 825 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 RPL23AP46-201ENST00000438548 490 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC073587.1-201ENST00000447093 876 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC074050.1-201ENST00000563247 211 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 RN7SL703P-201ENST00000578485 302 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 RN7SL600P-201ENST00000581811 299 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC008759.1-201ENST00000589783 983 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC024941.1-201ENST00000612250 334 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC023509.5-201ENST00000617434 807 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 OR4G1P-202ENST00000641173 1788 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 MIR372-201ENST00000362225 67 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AP000357.1-201ENST00000409926 1165 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 MIR1911-201ENST00000410783 80 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 KCTD10P1-201ENST00000434203 625 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 CDC27P1-201ENST00000445384 715 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 RPL7P22-201ENST00000466005 733 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 RPL35AP15-201ENST00000468042 339 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 OR5BC1P-201ENST00000529327 739 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC025884.1-201ENST00000556034 378 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AC007066.2-202ENST00000566531 914 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AL160290.3-201ENST00000604869 165 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AL392048.1-201ENST00000613946 534 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 MIR7154-201ENST00000620673 73 ntBASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.85□□□□□ -1.79
KIAA1549Q9HCM3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms