Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC3.66□□□□□ -1.82
LITAFQ99732 MTND4P34-201ENST00000572715 1371 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LITAFQ99732 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LITAFQ99732 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 RNU5D-1-201ENST00000363299 116 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 RNA5SP77-201ENST00000365394 120 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LITAFQ99732 RNU6-225P-201ENST00000384613 103 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LITAFQ99732 RNU6-1300P-201ENST00000391046 108 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL033519.1-201ENST00000407266 307 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 RNU2-5P-201ENST00000410533 180 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 RN7SKP29-201ENST00000410957 272 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 MTCO1P21-201ENST00000416634 589 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 OR6C64P-201ENST00000419708 825 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC007161.1-204ENST00000423039 460 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL049610.1-201ENST00000423374 372 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 RBMY2JP-201ENST00000425544 1059 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 RPS24P8-201ENST00000431490 402 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 RPL23AP19-201ENST00000436229 369 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 MTND4P6-201ENST00000438297 472 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 NPM1P23-201ENST00000440193 849 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 AL161722.1-201ENST00000446972 1032 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL591363.1-201ENST00000450091 483 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 DDX39BP2-208ENST00000453923 258 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC093166.4-201ENST00000457867 318 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 AL591473.1-201ENST00000464297 313 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC117394.1-201ENST00000477323 567 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC015724.1-201ENST00000478577 156 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC099521.1-201ENST00000482557 334 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 RN7SL570P-201ENST00000484405 292 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL024509.2-201ENST00000493462 493 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 DUTP7-201ENST00000507982 486 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC048346.1-201ENST00000510247 144 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC109471.1-201ENST00000511631 612 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 RNA5SP464-201ENST00000516251 108 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC106038.2-201ENST00000520706 568 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 MAL2-207ENST00000522828 603 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 BNIP3P1-201ENST00000547295 580 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AGGF1P4-201ENST00000568249 801 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 MIR4433B-201ENST00000581329 102 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC233702.9-201ENST00000581528 203 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 H3F3BP2-201ENST00000583907 357 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC006272.2-201ENST00000594725 163 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC133552.5-201ENST00000604266 540 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC112220.3-201ENST00000605502 502 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 RPSAP75-201ENST00000605848 301 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.66□□□□□ -1.82
LITAFQ99732 AC068726.1-201ENST00000610993 341 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL080312.2-201ENST00000613001 630 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC037198.3-201ENST00000616754 526 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AL512652.1-201ENST00000619006 500 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 BX005214.3-202ENST00000619809 325 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LITAFQ99732 AC015726.3-201ENST00000624501 418 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.66□□□□□ -1.82
LITAFQ99732 PCMTD1P7-201ENST00000634506 357 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 AC073869.8-201ENST00000641806 335 ntBASIC3.66□□□□□ -1.82
LITAFQ99732 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms