Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC119751.3-201ENST00000399720 670 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AL009179.1-201ENST00000406085 265 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC105402.1-201ENST00000413336 545 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 TCEA1P4-201ENST00000415066 844 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 RPS6P15-201ENST00000431996 751 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 RPS26P30-201ENST00000443431 335 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 HMGB3P6-201ENST00000444896 598 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 PTENP1-201ENST00000447117 1215 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC112492.1-201ENST00000449607 712 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 RN7SL809P-201ENST00000482040 297 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 RN7SL547P-201ENST00000490793 290 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 RNA5SP34-201ENST00000516887 130 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 DEFB130C-202ENST00000530001 230 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 OR5AM1P-201ENST00000532136 1032 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC007834.2-201ENST00000536310 343 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 OSBPL9P5-201ENST00000542581 171 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 OR11H3P-201ENST00000554547 982 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC009094.1-201ENST00000564443 426 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AL020997.3-201ENST00000602843 359 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC007349.4-201ENST00000608114 532 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC011472.4-201ENST00000615848 491 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC005840.5-201ENST00000619166 599 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC079416.3-201ENST00000624479 549 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC007996.1-201ENST00000620414 2821 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 METTL21EP-201ENST00000298105 713 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 ENSAP3-201ENST00000312710 333 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 SNORD56.6-201ENST00000384569 71 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 MIR223-201ENST00000385204 110 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 MIR1271-201ENST00000408537 86 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 RNU4-34P-201ENST00000410431 124 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AL008987.1-201ENST00000415528 237 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 LINC01881-201ENST00000416103 412 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS50Q96JG6 RAC1P8-201ENST00000427086 527 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 RPL7P56-201ENST00000429441 717 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 CFL1P1-202ENST00000432948 411 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 GTF3AP5-201ENST00000442645 697 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC005002.1-201ENST00000447458 540 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 RPL10P17-201ENST00000453852 316 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 CDC42P1-201ENST00000456658 548 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 RN7SL515P-201ENST00000463999 297 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 MYL12BP2-201ENST00000503948 512 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC091860.1-201ENST00000505723 432 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS50Q96JG6 PRELID3BP4-201ENST00000515476 571 ntBASIC5.23□□□□□ -1.57
VPS50Q96JG6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms