Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-761P-201ENST00000384148 107 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 MT-RNR1-201ENST00000389680 954 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 ENSAP1-201ENST00000392855 326 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 RNA5SP36-201ENST00000410197 133 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 BX119904.3-201ENST00000428194 957 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 HMGB3P5-201ENST00000428894 612 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 AC018644.1-201ENST00000429934 551 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 RPEP2-201ENST00000432149 701 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 RNA5SP73-201ENST00000516744 108 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 SNRPGP1-201ENST00000553864 222 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 AC010201.1-201ENST00000605051 540 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 AP002360.3-201ENST00000607673 710 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 RNU6-84P-201ENST00000607737 102 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC007342.9-201ENST00000623877 1385 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 MTCO1P8-201ENST00000416914 1523 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 RNA5SP387-201ENST00000364226 106 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 SNORA62.3-201ENST00000365110 153 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 AL672167.2-201ENST00000377164 879 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 MTND3P20-201ENST00000407663 186 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 CTSL3P-202ENST00000412179 788 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 RPL6P29-201ENST00000414863 865 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC013268.2-201ENST00000420753 337 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 FAM204CP-201ENST00000424489 642 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC115285.1-201ENST00000424879 736 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 OR8F1P-201ENST00000425243 930 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 RPL21P91-201ENST00000429231 479 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 UBE2V2P3-201ENST00000433562 437 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 ARAFP2-201ENST00000440565 559 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 BTBD7P2-201ENST00000441962 620 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 IFITM8P-201ENST00000522529 394 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC009712.1-201ENST00000564938 316 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC025175.1-201ENST00000606482 759 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AC067931.1-201ENST00000624190 671 ntBASIC5.28□□□□□ -1.56
SNED1Q8TER0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNED1Q8TER0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.28□□□□□ -1.56
SNED1Q8TER0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNED1Q8TER0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 SNORD46.1-201ENST00000364139 104 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 RNU1-63P-201ENST00000383902 164 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 TPT1P2-201ENST00000413105 503 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 RPL36AP10-201ENST00000421785 322 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 AC013410.2-201ENST00000422627 201 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 AL512326.1-201ENST00000443050 721 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 AL500522.2-201ENST00000448562 343 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 PRSS3P4-201ENST00000453323 162 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 AC010374.1-201ENST00000503762 1237 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 RNA5SP446-201ENST00000515955 82 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 AC109635.6-201ENST00000525487 1113 ntBASIC5.27□□□□□ -1.57
SNED1Q8TER0 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.27□□□□□ -1.57
SNED1Q8TER0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms