Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL109941.1-201ENST00000401925 229 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 RN7SKP167-201ENST00000411047 285 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 TRIM60P17-201ENST00000415181 719 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL590609.2-201ENST00000421430 368 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 RPL23AP93-201ENST00000440847 484 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 RPS3AP53-201ENST00000454716 778 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC008897.1-201ENST00000494006 347 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 MTND4LP2-201ENST00000502312 285 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 NDUFA5P12-201ENST00000503796 343 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC107016.1-201ENST00000550463 337 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC090181.2-201ENST00000602975 672 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC073091.2-201ENST00000603205 907 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC013244.1-201ENST00000604279 193 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AP002360.3-201ENST00000607673 710 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 MIR7155-201ENST00000615925 56 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL138721.1-201ENST00000616756 179 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL445528.2-201ENST00000620582 470 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 AL450326.2-201ENST00000421913 1962 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC021146.4-201ENST00000309229 279 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 OR1F12-201ENST00000402365 945 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL603766.1-201ENST00000407763 664 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 CASKP1-201ENST00000412870 582 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC062016.2-201ENST00000420950 676 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 HLA-N-201ENST00000437516 135 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL138787.1-202ENST00000437804 898 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL133477.1-201ENST00000457472 514 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC026348.1-201ENST00000462549 1053 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC022336.1-201ENST00000475510 337 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC008638.1-201ENST00000506035 866 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 PARP4P3-201ENST00000510265 317 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AP001542.1-201ENST00000591314 200 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 BPIFA4P-203ENST00000603168 689 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC005084.1-201ENST00000605160 304 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC211433.2-201ENST00000608433 387 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL592494.3-201ENST00000609485 464 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC078899.5-201ENST00000612475 178 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AC015722.2-201ENST00000622210 551 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 LINC01808-202ENST00000641680 1116 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AL356317.1-201ENST00000396110 1436 ntBASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC50Q8IVM0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 RNA5SP22-201ENST00000365393 109 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms