Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC96Q2M329 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC96Q2M329 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC96Q2M329 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC96Q2M329 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC96Q2M329 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC96Q2M329 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC96Q2M329 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC96Q2M329 AL445487.1-201ENST00000415694 1580 ntBASIC5.63□□□□□ -1.51
CCDC96Q2M329 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC96Q2M329 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 RSU1P3-201ENST00000412878 835 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AL590139.1-201ENST00000416267 400 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 BX510359.2-201ENST00000417920 305 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC009965.2-201ENST00000425328 970 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AL160175.1-201ENST00000428124 247 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 RPS26P4-201ENST00000431743 355 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 SDR42E1P3-201ENST00000438345 502 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 RPL36AP15-201ENST00000444514 266 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AL513533.1-201ENST00000453728 415 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC005229.2-201ENST00000456995 399 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 RPL7P48-201ENST00000461513 746 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 RN7SL738P-201ENST00000470264 297 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 HMGB1P46-201ENST00000520062 610 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 OR8K2P-201ENST00000524645 927 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AGGF1P9-201ENST00000561884 913 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC021483.2-201ENST00000567415 758 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 ELOCP28-201ENST00000590044 317 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 uc_338.18-201ENST00000615451 175 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC016957.2-201ENST00000616998 848 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 MIR6853-201ENST00000619642 74 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AL391262.2-201ENST00000622466 494 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AP000648.2-201ENST00000624182 404 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 CYP1D1P-201ENST00000416662 1433 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC010928.1-201ENST00000592477 1447 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AC025574.1-201ENST00000554784 1653 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 AL118496.1-201ENST00000440201 1812 ntBASIC5.62□□□□□ -1.51
CCDC96Q2M329 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC96Q2M329 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC96Q2M329 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 AL590240.1-201ENST00000334118 313 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 RNU4-39P-201ENST00000362455 127 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 OR6K3-202ENST00000368146 996 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 SNORA56-201ENST00000383966 129 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 MIR192-201ENST00000384915 110 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 MIR708-201ENST00000390708 88 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 MIR298-201ENST00000401212 88 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 RPS27AP11-201ENST00000402798 447 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 Y_RNA.625-201ENST00000411256 107 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 MTND2P21-201ENST00000436242 1042 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 AC005154.2-201ENST00000438110 379 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 MTCO3P43-201ENST00000440974 771 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 RN7SL354P-201ENST00000469282 294 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 AC011005.3-201ENST00000491624 395 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 RPL23AP72-201ENST00000492447 435 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 AC105031.1-201ENST00000518550 476 ntBASIC5.61□□□□□ -1.51
CCDC96Q2M329 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC96Q2M329 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC96Q2M329 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC96Q2M329 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms