Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL133445.1-201ENST00000467051 452 ntBASIC4.96□□□□□ -1.62
RAE1P78406 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.96□□□□□ -1.62
RAE1P78406 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.96□□□□□ -1.62
RAE1P78406 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.96□□□□□ -1.62
RAE1P78406 AC118282.2-201ENST00000508739 374 ntBASIC4.96□□□□□ -1.62
RAE1P78406 NDUFB4P12-201ENST00000513465 390 ntBASIC4.96□□□□□ -1.62
RAE1P78406 RNA5SP362-201ENST00000516048 118 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.96□□□□□ -1.62
RAE1P78406 C1GALT1P3-201ENST00000522049 819 ntBASIC4.96□□□□□ -1.62
RAE1P78406 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.96□□□□□ -1.62
RAE1P78406 AC092747.2-201ENST00000545069 983 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AC127381.1-201ENST00000555979 939 ntBASIC4.96□□□□□ -1.62
RAE1P78406 NIFKP8-201ENST00000560500 874 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AC122134.1-201ENST00000565664 1104 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AC002400.1-201ENST00000569310 726 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AC015726.1-201ENST00000602353 681 ntBASIC4.96□□□□□ -1.62
RAE1P78406 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.96□□□□□ -1.62
RAE1P78406 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.96□□□□□ -1.62
RAE1P78406 AP005137.2-201ENST00000609238 400 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AL603755.1-201ENST00000619504 163 ntBASIC4.96□□□□□ -1.62
RAE1P78406 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.96□□□□□ -1.62
RAE1P78406 GVINP1-202ENST00000531871 7271 ntBASIC4.96□□□□□ -1.62
RAE1P78406 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
RAE1P78406 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.96□□□□□ -1.62
RAE1P78406 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RAE1P78406 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.96□□□□□ -1.62
RAE1P78406 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 AC004817.4-201ENST00000602396 3625 ntBASIC4.96□□□□□ -1.62
RAE1P78406 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 AL450345.1-202ENST00000605741 3881 ntBASIC4.96□□□□□ -1.62
RAE1P78406 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.95□□□□□ -1.62
RAE1P78406 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.95□□□□□ -1.62
RAE1P78406 RNA5SP183-201ENST00000362452 119 ntBASIC4.95□□□□□ -1.62
RAE1P78406 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RAE1P78406 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 RNU6-225P-201ENST00000384613 103 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC093719.1-202ENST00000392735 373 ntBASIC4.95□□□□□ -1.62
RAE1P78406 OR8V1P-201ENST00000395193 873 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AL513325.1-201ENST00000417716 1034 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.95□□□□□ -1.62
RAE1P78406 MTCO1P3-201ENST00000429327 192 ntBASIC4.95□□□□□ -1.62
RAE1P78406 FAM96AP1-201ENST00000430879 482 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC009238.2-201ENST00000431026 355 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.95□□□□□ -1.62
RAE1P78406 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.95□□□□□ -1.62
RAE1P78406 AL161722.2-201ENST00000434731 981 ntBASIC4.95□□□□□ -1.62
RAE1P78406 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.95□□□□□ -1.62
RAE1P78406 RPL7AP61-201ENST00000443410 636 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.95□□□□□ -1.62
RAE1P78406 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.95□□□□□ -1.62
RAE1P78406 AL035551.1-201ENST00000446931 348 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.95□□□□□ -1.62
RAE1P78406 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 BX248409.1-201ENST00000455497 255 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AL133244.1-201ENST00000456007 258 ntBASIC4.95□□□□□ -1.62
RAE1P78406 SETP20-201ENST00000457046 852 ntBASIC4.95□□□□□ -1.62
RAE1P78406 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.95□□□□□ -1.62
RAE1P78406 AC090114.3-201ENST00000479267 829 ntBASIC4.95□□□□□ -1.62
RAE1P78406 GAPDHP39-201ENST00000481866 979 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.95□□□□□ -1.62
RAE1P78406 ENPP7P11-201ENST00000505915 627 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AP000619.2-201ENST00000546014 969 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.95□□□□□ -1.62
RAE1P78406 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.95□□□□□ -1.62
RAE1P78406 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 MIR3912-201ENST00000577566 105 ntBASIC4.95□□□□□ -1.62
RAE1P78406 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 AC127024.5-201ENST00000580085 462 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.95□□□□□ -1.62
RAE1P78406 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.95□□□□□ -1.62
RAE1P78406 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.95□□□□□ -1.62
RAE1P78406 AC069307.1-201ENST00000602820 447 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC011453.2-201ENST00000603737 729 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.95□□□□□ -1.62
RAE1P78406 AP005432.2-201ENST00000608162 586 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC109309.2-201ENST00000612597 332 ntBASIC4.95□□□□□ -1.62
RAE1P78406 AC105227.2-201ENST00000615075 605 ntBASIC4.95□□□□□ -1.62
RAE1P78406 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RAE1P78406 AC009090.3-201ENST00000616553 565 ntBASIC4.95□□□□□ -1.62
RAE1P78406 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms