Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB4P54760 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB4P54760 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB4P54760 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB4P54760 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
EPHB4P54760 PANDAR-201ENST00000629595 1506 ntBASIC6.09□□□□□ -1.44
EPHB4P54760 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.09□□□□□ -1.44
EPHB4P54760 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
EPHB4P54760 MAPK10-328ENST00000641553 4009 ntBASIC6.09□□□□□ -1.44
EPHB4P54760 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB4P54760 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB4P54760 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 RNU6-83P-201ENST00000384568 112 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 Y_RNA.578-201ENST00000390903 88 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 RPL7P27-201ENST00000403775 720 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AL589994.1-201ENST00000404962 340 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 MTND1P23-201ENST00000416931 372 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC008173.1-201ENST00000418901 264 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 AL606490.7-201ENST00000433136 191 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC000041.1-201ENST00000439655 175 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 Z95152.1-201ENST00000453556 656 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 MRPL35P4-201ENST00000453682 566 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 RPL5P22-201ENST00000480199 884 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 RN7SL459P-201ENST00000481078 302 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 RNU6-232P-201ENST00000517144 64 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC067904.2-201ENST00000517322 1283 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 IGLV3-24-201ENST00000517477 197 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC060788.1-201ENST00000521318 469 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.08□□□□□ -1.44
EPHB4P54760 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.08□□□□□ -1.44
EPHB4P54760 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.08□□□□□ -1.44
EPHB4P54760 PCNPP1-201ENST00000552501 511 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB4P54760 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB4P54760 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 MTCO3P22-201ENST00000603219 784 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB4P54760 NANOGP3-201ENST00000605855 286 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AP000255.1-201ENST00000610276 676 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC073114.1-201ENST00000612027 490 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AC010435.1-201ENST00000623353 1177 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AL359740.1-201ENST00000624340 592 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 AL353662.3-201ENST00000625131 237 ntBASIC6.08□□□□□ -1.44
EPHB4P54760 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB4P54760 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
EPHB4P54760 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
EPHB4P54760 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
EPHB4P54760 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB4P54760 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB4P54760 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB4P54760 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB4P54760 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
EPHB4P54760 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB4P54760 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB4P54760 AC114947.2-201ENST00000565748 2125 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB4P54760 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB4P54760 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB4P54760 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB4P54760 RNA5SP123-201ENST00000363244 119 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 RNVU1-6-201ENST00000364688 164 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 RN7SKP6-201ENST00000364795 319 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 RNU6-304P-201ENST00000364855 107 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 RNU6-867P-201ENST00000364956 107 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB4P54760 MIR130A-201ENST00000385274 89 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 AL356967.1-201ENST00000406305 431 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB4P54760 MTND4LP21-201ENST00000415303 295 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB4P54760 BX119904.1-201ENST00000432026 348 ntBASIC6.07□□□□□ -1.44
EPHB4P54760 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB4P54760 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB4P54760 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB4P54760 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB4P54760 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB4P54760 AC105399.1-202ENST00000447303 205 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms