Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC009318.3-201ENST00000616916 503 ntBASIC4.93□□□□□ -1.62
SSR1P43307 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
SSR1P43307 AC112694.2-201ENST00000623697 768 ntBASIC4.93□□□□□ -1.62
SSR1P43307 AL355852.1-201ENST00000454081 1771 ntBASIC4.93□□□□□ -1.62
SSR1P43307 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSR1P43307 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSR1P43307 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSR1P43307 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSR1P43307 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SSR1P43307 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.92□□□□□ -1.62
SSR1P43307 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSR1P43307 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.92□□□□□ -1.62
SSR1P43307 RNA5SP105-201ENST00000391123 113 ntBASIC4.92□□□□□ -1.62
SSR1P43307 AL590762.2-201ENST00000395798 571 ntBASIC4.92□□□□□ -1.62
SSR1P43307 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.92□□□□□ -1.62
SSR1P43307 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.92□□□□□ -1.62
SSR1P43307 PDSS1P1-201ENST00000422953 1114 ntBASIC4.92□□□□□ -1.62
SSR1P43307 AL645608.4-201ENST00000423619 154 ntBASIC4.92□□□□□ -1.62
SSR1P43307 FABP7P1-201ENST00000424004 391 ntBASIC4.92□□□□□ -1.62
SSR1P43307 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.92□□□□□ -1.62
SSR1P43307 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.92□□□□□ -1.62
SSR1P43307 Z80107.2-201ENST00000445127 392 ntBASIC4.92□□□□□ -1.62
SSR1P43307 AC104651.2-201ENST00000447549 528 ntBASIC4.92□□□□□ -1.62
SSR1P43307 OR6C72P-201ENST00000451403 892 ntBASIC4.92□□□□□ -1.62
SSR1P43307 RPS5P7-201ENST00000456664 608 ntBASIC4.92□□□□□ -1.62
SSR1P43307 AC090142.1-201ENST00000465776 462 ntBASIC4.92□□□□□ -1.62
SSR1P43307 SEPT7P6-201ENST00000469999 1143 ntBASIC4.92□□□□□ -1.62
SSR1P43307 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.92□□□□□ -1.62
SSR1P43307 AP001880.2-201ENST00000538233 448 ntBASIC4.92□□□□□ -1.62
SSR1P43307 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.92□□□□□ -1.62
SSR1P43307 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.92□□□□□ -1.62
SSR1P43307 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.92□□□□□ -1.62
SSR1P43307 AC021483.2-201ENST00000567415 758 ntBASIC4.92□□□□□ -1.62
SSR1P43307 VN1R84P-201ENST00000593697 235 ntBASIC4.92□□□□□ -1.62
SSR1P43307 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.92□□□□□ -1.62
SSR1P43307 AC005520.3-201ENST00000602874 370 ntBASIC4.92□□□□□ -1.62
SSR1P43307 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.92□□□□□ -1.62
SSR1P43307 AP000894.4-201ENST00000610185 483 ntBASIC4.92□□□□□ -1.62
SSR1P43307 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.92□□□□□ -1.62
SSR1P43307 AL355480.1-201ENST00000629041 99 ntBASIC4.92□□□□□ -1.62
SSR1P43307 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.92□□□□□ -1.62
SSR1P43307 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSR1P43307 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSR1P43307 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
SSR1P43307 AC108751.5-201ENST00000492880 1336 ntBASIC4.92□□□□□ -1.62
SSR1P43307 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
SSR1P43307 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SSR1P43307 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SSR1P43307 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSR1P43307 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSR1P43307 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.91□□□□□ -1.62
SSR1P43307 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSR1P43307 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSR1P43307 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSR1P43307 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSR1P43307 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSR1P43307 SNORA51.8-201ENST00000384234 132 ntBASIC4.91□□□□□ -1.62
SSR1P43307 SNORD96B-201ENST00000386148 79 ntBASIC4.91□□□□□ -1.62
SSR1P43307 SPTLC1P2-201ENST00000407089 121 ntBASIC4.91□□□□□ -1.62
SSR1P43307 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.91□□□□□ -1.62
SSR1P43307 COX6B1P1-201ENST00000415962 213 ntBASIC4.91□□□□□ -1.62
SSR1P43307 AC073069.1-201ENST00000428657 441 ntBASIC4.91□□□□□ -1.62
SSR1P43307 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.91□□□□□ -1.62
SSR1P43307 AL353748.1-201ENST00000440753 474 ntBASIC4.91□□□□□ -1.62
SSR1P43307 AC063943.1-201ENST00000465434 453 ntBASIC4.91□□□□□ -1.62
SSR1P43307 RN7SL177P-201ENST00000476596 299 ntBASIC4.91□□□□□ -1.62
SSR1P43307 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.91□□□□□ -1.62
SSR1P43307 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.91□□□□□ -1.62
SSR1P43307 AC090510.2-201ENST00000617465 629 ntBASIC4.91□□□□□ -1.62
SSR1P43307 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.91□□□□□ -1.62
SSR1P43307 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSR1P43307 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSR1P43307 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSR1P43307 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSR1P43307 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.9□□□□□ -1.62
SSR1P43307 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
SSR1P43307 DHX9P1-201ENST00000436565 3076 ntBASIC4.9□□□□□ -1.62
SSR1P43307 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSR1P43307 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.9□□□□□ -1.63
SSR1P43307 H2AFZP5-201ENST00000446960 382 ntBASIC4.9□□□□□ -1.63
SSR1P43307 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.9□□□□□ -1.63
SSR1P43307 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 AC087385.1-201ENST00000475062 312 ntBASIC4.9□□□□□ -1.63
SSR1P43307 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.9□□□□□ -1.63
SSR1P43307 AC098799.3-201ENST00000506095 438 ntBASIC4.9□□□□□ -1.63
SSR1P43307 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 SNORA70.14-201ENST00000516205 110 ntBASIC4.9□□□□□ -1.63
SSR1P43307 RNA5SP309-201ENST00000516670 106 ntBASIC4.9□□□□□ -1.63
SSR1P43307 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSR1P43307 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.9□□□□□ -1.63
SSR1P43307 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.9□□□□□ -1.63
SSR1P43307 EDDM3DP-201ENST00000554692 434 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms