Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPL5P25-201ENST00000441148 775 ntBASIC7.2□□□□□ -1.26
RXRBP28702 SUMO2P2-201ENST00000456482 255 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AMD1P1-201ENST00000457220 922 ntBASIC7.2□□□□□ -1.26
RXRBP28702 RNU7-157P-201ENST00000459600 66 ntBASIC7.2□□□□□ -1.26
RXRBP28702 HMGB1P36-201ENST00000487709 576 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC083829.1-201ENST00000503756 657 ntBASIC7.2□□□□□ -1.26
RXRBP28702 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.2□□□□□ -1.26
RXRBP28702 AC005178.1-201ENST00000508392 440 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.2□□□□□ -1.26
RXRBP28702 AC008885.2-201ENST00000509506 930 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC021146.7-201ENST00000509604 775 ntBASIC7.2□□□□□ -1.26
RXRBP28702 RN7SKP92-201ENST00000517266 244 ntBASIC7.2□□□□□ -1.26
RXRBP28702 IGKV2-23-201ENST00000518729 323 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AP001804.1-201ENST00000526868 919 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.2□□□□□ -1.26
RXRBP28702 AL109766.1-201ENST00000555080 552 ntBASIC7.2□□□□□ -1.26
RXRBP28702 DUXAP1-201ENST00000556632 463 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.2□□□□□ -1.26
RXRBP28702 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.2□□□□□ -1.26
RXRBP28702 VN1R81P-201ENST00000602085 372 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC112230.1-201ENST00000604342 547 ntBASIC7.2□□□□□ -1.26
RXRBP28702 Z99129.1-201ENST00000612510 255 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC008498.1-201ENST00000613012 531 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC095031.1-201ENST00000623685 672 ntBASIC7.2□□□□□ -1.26
RXRBP28702 SEPT14P19-203ENST00000633205 211 ntBASIC7.2□□□□□ -1.26
RXRBP28702 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 ZNF90P1-201ENST00000480493 1951 ntBASIC7.2□□□□□ -1.26
RXRBP28702 UGT2B27P-201ENST00000505092 1620 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AOX3P-204ENST00000491025 2107 ntBASIC7.19□□□□□ -1.26
RXRBP28702 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.19□□□□□ -1.26
RXRBP28702 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.19□□□□□ -1.26
RXRBP28702 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 Y_RNA.359-201ENST00000365498 102 ntBASIC7.19□□□□□ -1.26
RXRBP28702 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.19□□□□□ -1.26
RXRBP28702 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.19□□□□□ -1.26
RXRBP28702 Y_RNA.560-201ENST00000384689 102 ntBASIC7.19□□□□□ -1.26
RXRBP28702 MT-TH-201ENST00000387441 69 ntBASIC7.19□□□□□ -1.26
RXRBP28702 PGBD4P8-201ENST00000412993 562 ntBASIC7.19□□□□□ -1.26
RXRBP28702 RPS7P9-201ENST00000414704 586 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.19□□□□□ -1.26
RXRBP28702 CCDC58P2-201ENST00000417131 366 ntBASIC7.19□□□□□ -1.26
RXRBP28702 RPL7P30-201ENST00000420888 709 ntBASIC7.19□□□□□ -1.26
RXRBP28702 RPS27AP7-201ENST00000422792 455 ntBASIC7.19□□□□□ -1.26
RXRBP28702 MOB1AP1-201ENST00000430903 535 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.19□□□□□ -1.26
RXRBP28702 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.19□□□□□ -1.26
RXRBP28702 AL109741.2-201ENST00000455561 343 ntBASIC7.19□□□□□ -1.26
RXRBP28702 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 AL024509.2-201ENST00000493462 493 ntBASIC7.19□□□□□ -1.26
RXRBP28702 RPS6P4-201ENST00000494693 758 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 AC004069.2-201ENST00000505438 1114 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC111000.3-201ENST00000508057 576 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC010285.3-201ENST00000511668 676 ntBASIC7.19□□□□□ -1.26
RXRBP28702 RN7SKP288-201ENST00000516227 268 ntBASIC7.19□□□□□ -1.26
RXRBP28702 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.19□□□□□ -1.26
RXRBP28702 AC118273.2-201ENST00000532092 465 ntBASIC7.19□□□□□ -1.26
RXRBP28702 OR4A40P-201ENST00000533878 948 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AP000873.5-201ENST00000533906 236 ntBASIC7.19□□□□□ -1.26
RXRBP28702 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.19□□□□□ -1.26
RXRBP28702 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.19□□□□□ -1.26
RXRBP28702 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.19□□□□□ -1.26
RXRBP28702 DPPA3P2-202ENST00000557188 1219 ntBASIC7.19□□□□□ -1.26
RXRBP28702 NPM1P47-201ENST00000560843 856 ntBASIC7.19□□□□□ -1.26
RXRBP28702 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.19□□□□□ -1.26
RXRBP28702 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.19□□□□□ -1.26
RXRBP28702 AC011260.1-201ENST00000578420 472 ntBASIC7.19□□□□□ -1.26
RXRBP28702 MIR4691-201ENST00000583764 85 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC068790.7-201ENST00000602347 528 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AL513327.3-201ENST00000602618 469 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AL683813.2-201ENST00000605245 502 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AL592221.1-201ENST00000605266 382 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AL451074.6-201ENST00000608512 729 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC013476.2-201ENST00000614456 459 ntBASIC7.19□□□□□ -1.26
RXRBP28702 RMST_10.1-201ENST00000616309 154 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC092794.2-201ENST00000620933 563 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AC019080.5-201ENST00000624891 757 ntBASIC7.19□□□□□ -1.26
RXRBP28702 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.19□□□□□ -1.26
RXRBP28702 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RXRBP28702 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
RXRBP28702 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RXRBP28702 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RXRBP28702 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
RXRBP28702 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RXRBP28702 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RXRBP28702 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RXRBP28702 AL359715.3-201ENST00000569267 2123 ntBASIC7.18□□□□□ -1.26
RXRBP28702 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.18□□□□□ -1.26
RXRBP28702 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RXRBP28702 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.18□□□□□ -1.26
RXRBP28702 U6.112-201ENST00000384129 70 ntBASIC7.18□□□□□ -1.26
RXRBP28702 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms