Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTLA4P16410 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.82□□□□□ -1.8
CTLA4P16410 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.82□□□□□ -1.8
CTLA4P16410 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTLA4P16410 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.82□□□□□ -1.8
CTLA4P16410 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CTLA4P16410 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTLA4P16410 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTLA4P16410 AL450326.2-201ENST00000421913 1962 ntBASIC3.82□□□□□ -1.8
CTLA4P16410 AC025031.4-201ENST00000621248 3271 ntBASIC3.82□□□□□ -1.8
CTLA4P16410 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
CTLA4P16410 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.81□□□□□ -1.8
CTLA4P16410 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CTLA4P16410 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 RNA5SP52-201ENST00000362448 134 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 OR13C3-201ENST00000374781 1108 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 RNA5SP332-201ENST00000391063 115 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 RPS3AP23-201ENST00000401762 784 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 SNORA11F-201ENST00000408237 128 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 SMC4P1-201ENST00000414479 527 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 AC119751.6-201ENST00000416712 186 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.81□□□□□ -1.8
CTLA4P16410 AL132765.1-201ENST00000434165 553 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 CEACAMP1-201ENST00000434624 1035 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.81□□□□□ -1.8
CTLA4P16410 RPL23AP52-201ENST00000439311 478 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.81□□□□□ -1.8
CTLA4P16410 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.81□□□□□ -1.8
CTLA4P16410 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.81□□□□□ -1.8
CTLA4P16410 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.81□□□□□ -1.8
CTLA4P16410 RPL5P16-201ENST00000471467 790 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 RPS27AP16-201ENST00000492222 470 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.81□□□□□ -1.8
CTLA4P16410 AC006499.6-201ENST00000511169 607 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.81□□□□□ -1.8
CTLA4P16410 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.81□□□□□ -1.8
CTLA4P16410 RNA5SP228-201ENST00000516232 133 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.81□□□□□ -1.8
CTLA4P16410 AC113403.1-201ENST00000604910 193 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 AC025175.1-201ENST00000606482 759 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 AC023813.4-201ENST00000607580 580 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 uc_338.13-201ENST00000618243 179 ntBASIC3.81□□□□□ -1.8
CTLA4P16410 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CTLA4P16410 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CTLA4P16410 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
CTLA4P16410 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTLA4P16410 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTLA4P16410 MFSD8-216ENST00000641147 4009 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTLA4P16410 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTLA4P16410 AC000123.3-201ENST00000624029 4975 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTLA4P16410 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CTLA4P16410 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CTLA4P16410 Z98755.1-201ENST00000407015 1384 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTLA4P16410 MAPK10-304ENST00000641341 3984 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC093535.2-201ENST00000624769 2326 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CTLA4P16410 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 RNU6-398P-201ENST00000384143 109 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.8□□□□□ -1.8
CTLA4P16410 CYCSP10-201ENST00000417973 294 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC092570.3-201ENST00000420113 693 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 EIF1P3-201ENST00000423841 334 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.8□□□□□ -1.8
CTLA4P16410 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.8□□□□□ -1.8
CTLA4P16410 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 MTND2P28-201ENST00000457540 1044 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC017007.3-201ENST00000479865 435 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AK3P4-201ENST00000504283 583 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC093720.1-201ENST00000505681 714 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.8□□□□□ -1.8
CTLA4P16410 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTLA4P16410 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 RN7SKP92-201ENST00000517266 244 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 AC027176.2-201ENST00000559166 746 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC234775.3-201ENST00000564612 656 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.8□□□□□ -1.8
CTLA4P16410 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CTLA4P16410 AC020915.5-201ENST00000596836 964 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 VN1R81P-201ENST00000602085 372 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 MIR432-201ENST00000606207 94 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AL133406.3-201ENST00000606817 541 ntBASIC3.8□□□□□ -1.8
CTLA4P16410 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms