Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 RNA5SP105-201ENST00000391123 113 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AC104297.1-201ENST00000393779 870 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 MIR1271-201ENST00000408537 86 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 RPL23AP26-201ENST00000412728 464 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AC009302.1-201ENST00000417147 390 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AL139095.3-201ENST00000419672 1203 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA1P02708 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.94□□□□□ -1.62
CHRNA1P02708 ACTR3P2-201ENST00000439585 1257 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 RHEBP2-201ENST00000450289 600 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.94□□□□□ -1.62
CHRNA1P02708 DHFRP3-201ENST00000455595 559 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AC093824.1-201ENST00000508796 343 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AF186190.1-201ENST00000517470 480 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA1P02708 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.94□□□□□ -1.62
CHRNA1P02708 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.94□□□□□ -1.62
CHRNA1P02708 FAM60CP-201ENST00000591086 664 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AC009303.3-201ENST00000591103 736 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA1P02708 AC133552.5-201ENST00000604266 540 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA1P02708 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.94□□□□□ -1.62
CHRNA1P02708 CASC19-206ENST00000641028 1430 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHRNA1P02708 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.94□□□□□ -1.62
CHRNA1P02708 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CHRNA1P02708 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CHRNA1P02708 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA1P02708 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA1P02708 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AC000123.3-201ENST00000624029 4975 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 RNU1-132P-201ENST00000364300 164 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AC019155.1-201ENST00000382242 574 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 RNU6-891P-201ENST00000384280 111 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 SNORA57.1-201ENST00000391227 145 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 RN7SKP263-201ENST00000411194 309 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AL358176.3-201ENST00000420757 454 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 OR2AH1P-201ENST00000425717 928 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 TPTE2P1-204ENST00000435256 593 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AC022431.1-201ENST00000450941 438 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AL133244.1-201ENST00000456007 258 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 RPL31P53-201ENST00000457065 348 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA1P02708 RPL7P19-201ENST00000469948 618 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AC105918.1-201ENST00000474399 838 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AC041039.1-201ENST00000485656 536 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA1P02708 MRPL49P2-201ENST00000521066 465 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AP003730.1-201ENST00000524605 285 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 TRAV8-5-201ENST00000537369 341 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 PDCD5P1-201ENST00000543528 309 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA1P02708 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.93□□□□□ -1.62
CHRNA1P02708 IPO5P1-202ENST00000600039 287 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AC131238.1-201ENST00000617135 328 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 AC015871.5-202ENST00000623252 701 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 MIR3653-201ENST00000625572 110 ntBASIC4.93□□□□□ -1.62
CHRNA1P02708 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CHRNA1P02708 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.93□□□□□ -1.62
CHRNA1P02708 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CHRNA1P02708 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA1P02708 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA1P02708 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA1P02708 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.92□□□□□ -1.62
CHRNA1P02708 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA1P02708 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA1P02708 LINC00622-201ENST00000562811 1570 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 EIF2AP4-201ENST00000424793 1781 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
CHRNA1P02708 SNORA37-201ENST00000384504 129 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.92□□□□□ -1.62
CHRNA1P02708 NPM1P26-201ENST00000426339 738 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.92□□□□□ -1.62
CHRNA1P02708 RPL7P33-201ENST00000444159 742 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AC104651.2-201ENST00000447549 528 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.92□□□□□ -1.62
CHRNA1P02708 UQCRHP4-201ENST00000471686 272 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.92□□□□□ -1.62
CHRNA1P02708 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.92□□□□□ -1.62
CHRNA1P02708 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms